Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CWR53_RS01690 Genome accession   NZ_CP025035
Coordinates   388329..388730 (+) Length   133 a.a.
NCBI ID   WP_058604060.1    Uniprot ID   -
Organism   Pseudomonas sp. SGAir0191     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 383329..393730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWR53_RS01660 (CWR53_01675) - 383458..384462 (-) 1005 WP_058604064.1 aspartate carbamoyltransferase catalytic subunit -
  CWR53_RS01665 (CWR53_01680) pyrR 384475..384993 (-) 519 WP_100850649.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CWR53_RS01670 (CWR53_01685) ruvX 385043..385480 (-) 438 WP_058604062.1 Holliday junction resolvase RuvX -
  CWR53_RS01675 (CWR53_01690) - 385480..386049 (-) 570 WP_023532990.1 YqgE/AlgH family protein -
  CWR53_RS01680 (CWR53_01695) - 386096..386995 (-) 900 WP_027914038.1 energy transducer TonB -
  CWR53_RS01685 (CWR53_01700) gshB 387136..388089 (-) 954 WP_100850650.1 glutathione synthase -
  CWR53_RS01690 (CWR53_01705) pilG 388329..388730 (+) 402 WP_058604060.1 PleD family two-component system response regulator Regulator
  CWR53_RS01695 (CWR53_01710) pilH 388779..389144 (+) 366 WP_058604059.1 twitching motility response regulator PilH -
  CWR53_RS01700 (CWR53_01715) - 389141..389692 (+) 552 WP_027914034.1 chemotaxis protein CheW -
  CWR53_RS01705 (CWR53_01720) - 389741..391765 (+) 2025 WP_241493095.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14573.85 Da        Isoelectric Point: 5.1550

>NTDB_id=257534 CWR53_RS01690 WP_058604060.1 388329..388730(+) (pilG) [Pseudomonas sp. SGAir0191]
MEQPLKVMVIDDSRTIRRTAQMLLGEVGCEVITASDGFDALAKIVDHNPAVIFVDVLMPRLDGYQTCAVIKQNSTFKDVP
VILLSSRDGLFDKARGRVVGSDQFLTKPFTKEELIEAIQAHVPGFATAQQTAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=257534 CWR53_RS01690 WP_058604060.1 388329..388730(+) (pilG) [Pseudomonas sp. SGAir0191]
ATGGAACAACCCCTGAAAGTGATGGTGATCGACGATTCACGCACCATTCGCCGCACGGCGCAGATGCTGCTCGGTGAGGT
GGGCTGCGAGGTCATCACTGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGATCACAACCCGGCCGTGATCTTCG
TCGACGTCTTGATGCCGCGTCTGGACGGCTACCAGACGTGCGCGGTGATCAAGCAGAACAGTACCTTCAAGGATGTCCCG
GTGATTCTGTTGTCCTCGCGCGACGGTTTGTTCGACAAGGCCCGCGGGCGTGTGGTCGGTTCTGATCAGTTTCTGACCAA
ACCGTTTACCAAGGAAGAACTGATCGAGGCGATACAGGCCCATGTGCCTGGATTCGCCACTGCTCAACAAACAGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.5

90.226

0.609

Multiple sequence alignment