Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CWR44_RS12345 Genome accession   NZ_CP025031
Coordinates   2501264..2502310 (-) Length   348 a.a.
NCBI ID   WP_011275375.1    Uniprot ID   A0A2A1K920
Organism   Staphylococcus haemolyticus strain SGAir0252     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2496264..2507310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWR44_RS12315 (CWR44_12265) - 2496807..2498054 (-) 1248 WP_011275381.1 aminopeptidase -
  CWR44_RS12320 (CWR44_12270) - 2498068..2498277 (-) 210 WP_011275380.1 DUF1128 domain-containing protein -
  CWR44_RS12325 (CWR44_12275) - 2498419..2498883 (+) 465 WP_011275379.1 low molecular weight protein-tyrosine-phosphatase -
  CWR44_RS12330 (CWR44_12280) - 2498889..2499173 (+) 285 WP_011275378.1 YtxH domain-containing protein -
  CWR44_RS12335 (CWR44_12285) - 2499370..2500581 (+) 1212 WP_011275377.1 YihY/virulence factor BrkB family protein -
  CWR44_RS12340 (CWR44_12290) vraR 2500645..2501274 (-) 630 WP_011275376.1 two-component system response regulator VraR Regulator
  CWR44_RS12345 (CWR44_12295) vraS 2501264..2502310 (-) 1047 WP_011275375.1 sensor histidine kinase Regulator
  CWR44_RS12350 (CWR44_12300) liaF 2502307..2503008 (-) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  CWR44_RS12355 (CWR44_12305) - 2503033..2503419 (-) 387 WP_011275373.1 hypothetical protein -
  CWR44_RS12360 (CWR44_12310) - 2503632..2504644 (+) 1013 Protein_2398 HoxN/HupN/NixA family nickel/cobalt transporter -
  CWR44_RS12365 (CWR44_12315) - 2504716..2505573 (+) 858 WP_011275370.1 SDR family oxidoreductase -
  CWR44_RS12370 (CWR44_12320) map 2505698..2506450 (-) 753 WP_011275369.1 type I methionyl aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40179.58 Da        Isoelectric Point: 6.0550

>NTDB_id=257509 CWR44_RS12345 WP_011275375.1 2501264..2502310(-) (vraS) [Staphylococcus haemolyticus strain SGAir0252]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDLYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIENERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=257509 CWR44_RS12345 WP_011275375.1 2501264..2502310(-) (vraS) [Staphylococcus haemolyticus strain SGAir0252]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATAGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATTGAGCATGCCATTGAAGGAGAAACAGTAGGTATCAATGATCAAAACATTGAGCTCTATAACGAAACCATAGATCT
TTATCAAACATTAGTTCCTCTAAATCAAGAGTTGCACCGTTTACGAATGAAAACGCAAAACTTAACTAATGAAAATTACA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGAATGAACGACAGAGATTAGCTCGCGAGTTACATGACTCTGTAAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCTATAAAAGAAACAAAATTAGAGGCACCGCTTGATCAACAAATACC
AGTTTTAGAGAAAATGGTTCAGGAATCTCAACTTGAAATGCGCGCATTATTACTTCATTTGAGACCTTTAGGACTAAAAG
ATAAATCACTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTCAAGGTTCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCTAATGGAACTAAAGTCACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAGG
GATTCAATGTTGACGAGAAATTAGAACAAAGTTATGGATTAAAAAATATGAGAGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTTTCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCATTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A1K920

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.643

99.713

0.914


Multiple sequence alignment