Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CWR44_RS10685 | Genome accession | NZ_CP025031 |
| Coordinates | 2172208..2173182 (-) | Length | 324 a.a. |
| NCBI ID | WP_011275668.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain SGAir0252 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2167208..2178182
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWR44_RS10645 (CWR44_10595) | gcvT | 2167758..2168849 (-) | 1092 | WP_011275675.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CWR44_RS10650 (CWR44_10600) | - | 2169038..2169556 (-) | 519 | WP_011275674.1 | shikimate kinase | - |
| CWR44_RS13680 (CWR44_10610) | - | 2169716..2170207 (-) | 492 | WP_011275673.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CWR44_RS10665 (CWR44_10615) | - | 2170125..2170424 (-) | 300 | WP_011275672.1 | hypothetical protein | - |
| CWR44_RS10670 (CWR44_10620) | comGD | 2170405..2170857 (-) | 453 | WP_370444504.1 | competence type IV pilus minor pilin ComGD | - |
| CWR44_RS10675 (CWR44_10625) | comGC | 2170838..2171158 (-) | 321 | WP_011275670.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CWR44_RS10680 (CWR44_10630) | comGB | 2171172..2172236 (-) | 1065 | WP_011275669.1 | competence type IV pilus assembly protein ComGB | - |
| CWR44_RS10685 (CWR44_10635) | comGA | 2172208..2173182 (-) | 975 | WP_011275668.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CWR44_RS10690 (CWR44_10640) | - | 2173234..2173860 (-) | 627 | WP_011275667.1 | MBL fold metallo-hydrolase | - |
| CWR44_RS10695 (CWR44_10645) | - | 2173862..2174185 (-) | 324 | WP_104948337.1 | MTH1187 family thiamine-binding protein | - |
| CWR44_RS10700 (CWR44_10650) | - | 2174185..2175171 (-) | 987 | WP_011275665.1 | ROK family glucokinase | - |
| CWR44_RS10705 (CWR44_10655) | - | 2175168..2175371 (-) | 204 | WP_011275664.1 | YqgQ family protein | - |
| CWR44_RS10710 (CWR44_10660) | - | 2175355..2176812 (-) | 1458 | WP_011275663.1 | rhomboid family protein | - |
| CWR44_RS10715 (CWR44_10665) | - | 2176828..2177364 (-) | 537 | WP_011275662.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| CWR44_RS10720 (CWR44_10670) | rpmG | 2177601..2177750 (-) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37137.14 Da Isoelectric Point: 8.6557
>NTDB_id=257500 CWR44_RS10685 WP_011275668.1 2172208..2173182(-) (comGA) [Staphylococcus haemolyticus strain SGAir0252]
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=257500 CWR44_RS10685 WP_011275668.1 2172208..2173182(-) (comGA) [Staphylococcus haemolyticus strain SGAir0252]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.325 |
99.691 |
0.651 |
| comGA | Staphylococcus aureus N315 |
65.325 |
99.691 |
0.651 |