Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | AM489_RS01145 | Genome accession | NZ_CP029745 |
| Coordinates | 237945..238310 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain AR_0110 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 232945..243310
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM489_RS01130 (AM489_01130) | pilK | 234289..235164 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| AM489_RS01135 (AM489_01135) | pilJ | 235225..237273 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| AM489_RS01140 (AM489_01140) | - | 237358..237894 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| AM489_RS01145 (AM489_01145) | pilH | 237945..238310 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| AM489_RS01150 (AM489_01150) | pilG | 238357..238764 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| AM489_RS01155 (AM489_01155) | gshB | 239019..239972 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| AM489_RS01160 (AM489_01160) | - | 240119..241012 (+) | 894 | WP_003084580.1 | TonB family protein | - |
| AM489_RS01165 (AM489_01165) | - | 241061..241630 (+) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| AM489_RS01170 (AM489_01170) | ruvX | 241630..242064 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| AM489_RS01175 (AM489_01175) | pyrR | 242176..242688 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=257330 AM489_RS01145 WP_003084587.1 237945..238310(-) (pilH) [Pseudomonas aeruginosa strain AR_0110]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=257330 AM489_RS01145 WP_003084587.1 237945..238310(-) (pilH) [Pseudomonas aeruginosa strain AR_0110]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |