Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   CWQ22_RS02795 Genome accession   NZ_CP025027
Coordinates   478671..479744 (+) Length   357 a.a.
NCBI ID   WP_000790647.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SGEHI2015-107     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 473671..484744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWQ22_RS02765 (CWQ22_02765) - 474564..475628 (+) 1065 WP_000021305.1 MmcQ/YjbR family DNA-binding protein -
  CWQ22_RS02770 (CWQ22_02770) asnA 475741..476733 (+) 993 WP_000748011.1 aspartate--ammonia ligase -
  CWQ22_RS02775 (CWQ22_02775) - 476778..477227 (-) 450 WP_000592256.1 thiol reductase thioredoxin -
  CWQ22_RS02780 (CWQ22_02780) rsmD 477358..477897 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  CWQ22_RS02785 (CWQ22_02785) - 477909..478199 (+) 291 WP_000384889.1 hypothetical protein -
  CWQ22_RS02790 (CWQ22_02790) coaD 478196..478681 (+) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  CWQ22_RS02795 (CWQ22_02795) sepM 478671..479744 (+) 1074 WP_000790647.1 SepM family pheromone-processing serine protease Regulator
  CWQ22_RS02800 (CWQ22_02800) - 479819..481153 (+) 1335 WP_000137512.1 bifunctional metallophosphatase/5'-nucleotidase -
  CWQ22_RS02805 (CWQ22_02805) - 481223..481801 (+) 579 WP_001224502.1 YutD-like domain-containing protein -
  CWQ22_RS02810 (CWQ22_02810) rlmN 481852..482958 (+) 1107 WP_001124994.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  CWQ22_RS02815 (CWQ22_02815) - 482958..483473 (+) 516 WP_000919803.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39165.33 Da        Isoelectric Point: 10.4286

>NTDB_id=257325 CWQ22_RS02795 WP_000790647.1 478671..479744(+) (sepM) [Streptococcus agalactiae strain SGEHI2015-107]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVFYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=257325 CWQ22_RS02795 WP_000790647.1 478671..479744(+) (sepM) [Streptococcus agalactiae strain SGEHI2015-107]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGACTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTTAGTCAAGCAACGCCA
GCTCAGGTTTTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTAGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGCACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.732

94.958

0.653


Multiple sequence alignment