Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CKO49_RS07560 | Genome accession | NZ_CP025023 |
| Coordinates | 1576194..1576493 (-) | Length | 99 a.a. |
| NCBI ID | WP_031787259.1 | Uniprot ID | A0A7U7PYR8 |
| Organism | Staphylococcus argenteus strain XNO106 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1571194..1581493
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKO49_RS07535 (CKO49_07535) | gcvPA | 1572407..1573753 (-) | 1347 | WP_031787255.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CKO49_RS07540 (CKO49_07540) | gcvT | 1573772..1574863 (-) | 1092 | WP_000093342.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CKO49_RS07545 (CKO49_07545) | - | 1575020..1575544 (-) | 525 | WP_031787256.1 | shikimate kinase | - |
| CKO49_RS07550 (CKO49_07550) | - | 1575531..1575680 (-) | 150 | WP_072324192.1 | hypothetical protein | - |
| CKO49_RS07555 (CKO49_07555) | comGF | 1575779..1576276 (-) | 498 | WP_072324133.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CKO49_RS07560 (CKO49_07560) | comGE | 1576194..1576493 (-) | 300 | WP_031787259.1 | hypothetical protein | Machinery gene |
| CKO49_RS07565 (CKO49_07565) | comGD | 1576480..1576926 (-) | 447 | WP_072324131.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CKO49_RS07570 (CKO49_07570) | comGC | 1576904..1577215 (-) | 312 | WP_000921699.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CKO49_RS07575 (CKO49_07575) | comGB | 1577230..1578300 (-) | 1071 | WP_031787261.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CKO49_RS07580 (CKO49_07580) | comGA | 1578272..1579246 (-) | 975 | WP_031787262.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CKO49_RS07585 (CKO49_07585) | - | 1579298..1579921 (-) | 624 | WP_031787263.1 | MBL fold metallo-hydrolase | - |
| CKO49_RS07590 (CKO49_07590) | - | 1579918..1580247 (-) | 330 | WP_001018874.1 | MTH1187 family thiamine-binding protein | - |
| CKO49_RS07595 (CKO49_07595) | - | 1580247..1581233 (-) | 987 | WP_000161316.1 | ROK family glucokinase | - |
| CKO49_RS07600 (CKO49_07600) | - | 1581233..1581433 (-) | 201 | WP_000087563.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11192.35 Da Isoelectric Point: 9.4577
>NTDB_id=257233 CKO49_RS07560 WP_031787259.1 1576194..1576493(-) (comGE) [Staphylococcus argenteus strain XNO106]
MKNYKLKASFFLDSMAAVMLVGLICLVLIPIMNQMRMNFYIEVKSIDASKTILTAASTNSKNELKKGVKIGEYVIKLDDK
QICAITNENSSKFKECIQY
MKNYKLKASFFLDSMAAVMLVGLICLVLIPIMNQMRMNFYIEVKSIDASKTILTAASTNSKNELKKGVKIGEYVIKLDDK
QICAITNENSSKFKECIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=257233 CKO49_RS07560 WP_031787259.1 1576194..1576493(-) (comGE) [Staphylococcus argenteus strain XNO106]
ATGAAAAATTATAAGCTCAAAGCATCATTCTTTTTAGATAGCATGGCAGCAGTTATGTTAGTAGGATTAATCTGTTTAGT
TTTAATACCAATAATGAATCAAATGCGTATGAATTTCTATATTGAAGTAAAAAGTATAGATGCATCAAAGACTATTCTAA
CTGCGGCTTCCACAAATAGTAAAAATGAGCTTAAAAAAGGAGTTAAAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACAAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
ATGAAAAATTATAAGCTCAAAGCATCATTCTTTTTAGATAGCATGGCAGCAGTTATGTTAGTAGGATTAATCTGTTTAGT
TTTAATACCAATAATGAATCAAATGCGTATGAATTTCTATATTGAAGTAAAAAGTATAGATGCATCAAAGACTATTCTAA
CTGCGGCTTCCACAAATAGTAAAAATGAGCTTAAAAAAGGAGTTAAAATTGGAGAATATGTTATTAAGTTGGATGATAAG
CAAATTTGTGCAATTACAAATGAAAATTCTTCAAAATTTAAAGAATGTATTCAATATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
57.576 |
100 |
0.576 |
| comGE | Staphylococcus aureus MW2 |
49.123 |
100 |
0.566 |