Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CWD84_RS14355 Genome accession   NZ_CP025001
Coordinates   2853814..2854278 (+) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus siamensis strain SCSIO 05746     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2848814..2859278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWD84_RS14330 (CWD84_14330) - 2849384..2849868 (-) 485 Protein_2824 hypothetical protein -
  CWD84_RS14335 (CWD84_14335) fadH 2849983..2850747 (-) 765 WP_060962920.1 2,4-dienoyl-CoA reductase -
  CWD84_RS14340 (CWD84_14340) - 2850891..2851754 (+) 864 WP_060962921.1 metallophosphoesterase -
  CWD84_RS14345 (CWD84_14345) - 2851829..2852323 (+) 495 WP_095240832.1 L,D-transpeptidase family protein -
  CWD84_RS14350 (CWD84_14350) - 2852399..2853691 (+) 1293 WP_060962922.1 MFS transporter -
  CWD84_RS14355 (CWD84_14355) kre 2853814..2854278 (+) 465 WP_013352067.1 YkyB family protein Regulator
  CWD84_RS14360 (CWD84_14360) cheV 2854322..2855233 (-) 912 WP_060962923.1 chemotaxis protein CheV -
  CWD84_RS22370 - 2855422..2855583 (+) 162 WP_167388676.1 hypothetical protein -
  CWD84_RS14365 (CWD84_14365) - 2855785..2856998 (+) 1214 Protein_2832 aminotransferase A -
  CWD84_RS14370 (CWD84_14370) - 2856979..2858799 (-) 1821 WP_060962925.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=257099 CWD84_RS14355 WP_013352067.1 2853814..2854278(+) (kre) [Bacillus siamensis strain SCSIO 05746]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=257099 CWD84_RS14355 WP_013352067.1 2853814..2854278(+) (kre) [Bacillus siamensis strain SCSIO 05746]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCCAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACATTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTAGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935

Multiple sequence alignment