Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   CVO91_RS09875 Genome accession   NZ_CP024974
Coordinates   1937280..1938329 (-) Length   349 a.a.
NCBI ID   WP_002942838.1    Uniprot ID   A0AA87F8C3
Organism   Streptococcus suis strain CZ130302     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1932280..1943329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS09855 (CVO91_09855) - 1933020..1934278 (+) 1259 Protein_1856 ISL3 family transposase -
  CVO91_RS09860 (CVO91_09860) - 1934806..1935333 (-) 528 WP_002942846.1 VanZ family protein -
  CVO91_RS09865 (CVO91_09865) rlmN 1935330..1936442 (-) 1113 WP_002942845.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  CVO91_RS09870 (CVO91_09870) - 1936451..1937092 (-) 642 WP_002942844.1 YutD-like domain-containing protein -
  CVO91_RS09875 (CVO91_09875) sepM 1937280..1938329 (-) 1050 WP_002942838.1 SepM family pheromone-processing serine protease Regulator
  CVO91_RS09880 (CVO91_09880) coaD 1938316..1938804 (-) 489 WP_002939048.1 pantetheine-phosphate adenylyltransferase -
  CVO91_RS09885 (CVO91_09885) rsmD 1938794..1939333 (-) 540 WP_014638485.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  CVO91_RS09890 (CVO91_09890) - 1939633..1940355 (-) 723 WP_002942822.1 hypothetical protein -
  CVO91_RS09895 (CVO91_09895) - 1940412..1940798 (-) 387 WP_002942820.1 rhodanese-like domain-containing protein -
  CVO91_RS09900 (CVO91_09900) - 1940798..1941016 (-) 219 WP_033875548.1 YqgQ family protein -
  CVO91_RS09905 (CVO91_09905) - 1941121..1941723 (-) 603 WP_002942815.1 response regulator transcription factor -
  CVO91_RS09910 (CVO91_09910) - 1941720..1942814 (-) 1095 WP_164071428.1 histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37647.63 Da        Isoelectric Point: 4.4590

>NTDB_id=256939 CVO91_RS09875 WP_002942838.1 1937280..1938329(-) (sepM) [Streptococcus suis strain CZ130302]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIAQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLALGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSVPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKEDPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=256939 CVO91_RS09875 WP_002942838.1 1937280..1938329(-) (sepM) [Streptococcus suis strain CZ130302]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAATTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCTGACAATGAAGAGTATTTTCGTATAGCACAGTTTTACAT
GGAGACATCGCAAAATATGGCGAAGTACCAAGGTTTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTACTTGCCTTGGCGGATGATTCGACCTTTAAAAAAGTTCTTAATATTGCTGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGCACTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGATGGTAAAATTATCAAATTGTCTAATGGCAAAAACGGGATAGGCATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGGTTCCGATTGATTTCCAAACGGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGAATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTTATTTCGGCAGCTAAGTCAGGTGCAAGTATCTTTTTCG
TACCAAATAATCCAGTTGATGTGGAAGTTTTGAAGGAAGATCCAAAGGCTAAAACCAACTATGAGGAAGCTAAAGAAGCT
GCGGAGAAAGCAGGATTGGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACGAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.807

99.427

0.605


Multiple sequence alignment