Detailed information
Bioinformatically predicted
Overview
| Name | comEC/comE3 | Type | Machinery gene |
| Locus tag | CV724_RS00720 | Genome accession | NZ_CP024952 |
| Coordinates | 156353..157666 (+) | Length | 437 a.a. |
| NCBI ID | WP_194151187.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain B125A | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 151353..162666
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV724_RS00700 (CV724_00700) | crdR | 151667..152308 (+) | 642 | WP_145726661.1 | copper response regulator transcription factor CrdR | - |
| CV724_RS00705 (CV724_00705) | crdS | 152274..153476 (+) | 1203 | WP_145726663.1 | copper-sensing histidine kinase CrdS | - |
| CV724_RS00710 (CV724_00710) | - | 153479..154879 (+) | 1401 | WP_145726664.1 | NAD(P)H-hydrate dehydratase | - |
| CV724_RS00715 (CV724_00715) | - | 154890..156356 (+) | 1467 | WP_108326088.1 | replicative DNA helicase | - |
| CV724_RS00720 (CV724_00720) | comEC/comE3 | 156353..157666 (+) | 1314 | WP_194151187.1 | ComEC/Rec2 family competence protein | Machinery gene |
| CV724_RS00725 (CV724_00725) | mqnP | 157737..158578 (+) | 842 | Protein_139 | menaquinone biosynthesis prenyltransferase MqnP | - |
| CV724_RS00730 (CV724_00730) | - | 158571..159065 (+) | 495 | WP_194151188.1 | hypothetical protein | - |
| CV724_RS00735 (CV724_00735) | - | 159078..159584 (+) | 507 | WP_000953098.1 | hypothetical protein | - |
| CV724_RS00740 (CV724_00740) | - | 159578..160381 (+) | 804 | WP_145726667.1 | phosphatidylserine decarboxylase | - |
| CV724_RS00745 (CV724_00745) | nadA | 160371..161381 (+) | 1011 | WP_145726668.1 | quinolinate synthase NadA | - |
| CV724_RS00750 (CV724_00750) | nadC | 161381..162202 (+) | 822 | WP_145726670.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 437 a.a. Molecular weight: 50056.91 Da Isoelectric Point: 9.8515
>NTDB_id=256655 CV724_RS00720 WP_194151187.1 156353..157666(+) (comEC/comE3) [Helicobacter pylori strain B125A]
MKDKTFQGAFELLTTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHARHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILGMPLTIPTILVSSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
MKDKTFQGAFELLTTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHARHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILGMPLTIPTILVSSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG
Nucleotide
Download Length: 1314 bp
>NTDB_id=256655 CV724_RS00720 WP_194151187.1 156353..157666(+) (comEC/comE3) [Helicobacter pylori strain B125A]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATTAACCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAGTG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAGATCAAACCCTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGCAAACAAGATTTCAAATCGCATG
CACGCCATTTCATTGACAGCGCTCATTCCAACGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTACTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTCTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTGTCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCTGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAGGCATGCCTTTAACCATCCCCACGATTTTGGTTTCTTCGCCCTTATGGCTTTTGGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATTAACCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAGTG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAGATCAAACCCTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGCAAACAAGATTTCAAATCGCATG
CACGCCATTTCATTGACAGCGCTCATTCCAACGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTACTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTCTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTGTCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCTGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAGGCATGCCTTTAACCATCCCCACGATTTTGGTTTCTTCGCCCTTATGGCTTTTGGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC/comE3 | Helicobacter pylori 26695 |
96.796 |
100 |
0.968 |