Detailed information
Bioinformatically predicted
Overview
| Name | comEC/comE3 | Type | Machinery gene |
| Locus tag | CV726_RS01195 | Genome accession | NZ_CP024950 |
| Coordinates | 258752..260065 (+) | Length | 437 a.a. |
| NCBI ID | WP_194151665.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain B130A | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 253752..265065
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV726_RS01175 (CV726_01185) | crdR | 254072..254713 (+) | 642 | WP_145939950.1 | copper response regulator transcription factor CrdR | - |
| CV726_RS01180 (CV726_01190) | crdS | 254679..255881 (+) | 1203 | WP_145939951.1 | copper-sensing histidine kinase CrdS | - |
| CV726_RS01185 (CV726_01195) | - | 255884..257278 (+) | 1395 | WP_145939952.1 | NAD(P)H-hydrate dehydratase | - |
| CV726_RS01190 (CV726_01200) | - | 257289..258755 (+) | 1467 | WP_145939953.1 | replicative DNA helicase | - |
| CV726_RS01195 (CV726_01205) | comEC/comE3 | 258752..260065 (+) | 1314 | WP_194151665.1 | ComEC/Rec2 family competence protein | Machinery gene |
| CV726_RS01200 (CV726_01210) | mqnP | 260092..260976 (+) | 885 | WP_145939954.1 | menaquinone biosynthesis prenyltransferase MqnP | - |
| CV726_RS01205 (CV726_01215) | - | 260969..261463 (+) | 495 | WP_194151666.1 | hypothetical protein | - |
| CV726_RS01210 (CV726_01220) | - | 261476..261982 (+) | 507 | WP_000953098.1 | hypothetical protein | - |
| CV726_RS01215 (CV726_01225) | - | 261976..262779 (+) | 804 | WP_145939956.1 | phosphatidylserine decarboxylase | - |
| CV726_RS01220 (CV726_01230) | nadA | 262769..263779 (+) | 1011 | WP_145939957.1 | quinolinate synthase NadA | - |
| CV726_RS01225 (CV726_01235) | nadC | 263779..264600 (+) | 822 | WP_145939958.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 437 a.a. Molecular weight: 50238.08 Da Isoelectric Point: 9.7420
>NTDB_id=256623 CV726_RS01195 WP_194151665.1 258752..260065(+) (comEC/comE3) [Helicobacter pylori strain B130A]
MKDKTFQGAFELLSTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKDLQYRHAQFFGRIKSCSFLESLKSCFFQTYSFSLTRQQDFKSHWRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSMSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLTIPTISVPSPLWLLGAHLFLT
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIIG
MKDKTFQGAFELLSTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKDLQYRHAQFFGRIKSCSFLESLKSCFFQTYSFSLTRQQDFKSHWRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSMSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLTIPTISVPSPLWLLGAHLFLT
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIIG
Nucleotide
Download Length: 1314 bp
>NTDB_id=256623 CV726_RS01195 WP_194151665.1 258752..260065(+) (comEC/comE3) [Helicobacter pylori strain B130A]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTATTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAGACCTCCAATACCGCCATGCGCAATTTTTTGGCAGGATCAAATCTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACACGACAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGATAGCGCTCATTCCAACGCTTTGGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTGGCCATTAGCGGGTTTCATTTGGGGATTTT
AAGCATGAGCGTGTATTTCCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGTTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATCTTGAGTTTTAAGCTTTTGGTTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTGGGGTCTTTATTGGATCATA
TTCTAAGCATGCCTTTAACAATCCCCACGATTTCGGTTCCTTCACCCTTATGGCTTTTAGGGGCGCATTTATTTTTAACG
ATTTTGAGTGTGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTATAGGTTAG
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTATTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAGACCTCCAATACCGCCATGCGCAATTTTTTGGCAGGATCAAATCTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACACGACAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGATAGCGCTCATTCCAACGCTTTGGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTGGCCATTAGCGGGTTTCATTTGGGGATTTT
AAGCATGAGCGTGTATTTCCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGTTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATCTTGAGTTTTAAGCTTTTGGTTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTGGGGTCTTTATTGGATCATA
TTCTAAGCATGCCTTTAACAATCCCCACGATTTCGGTTCCTTCACCCTTATGGCTTTTAGGGGCGCATTTATTTTTAACG
ATTTTGAGTGTGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTATAGGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC/comE3 | Helicobacter pylori 26695 |
95.195 |
100 |
0.952 |