Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   MGAS9429_RS04960 Genome accession   NC_008021
Coordinates   970774..971844 (-) Length   356 a.a.
NCBI ID   WP_044565073.1    Uniprot ID   Q1JLL7
Organism   Streptococcus pyogenes MGAS9429     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 965774..976844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS9429_RS04945 (MGAS9429_Spy1011) - 966949..968346 (+) 1398 WP_002989754.1 oxaloacetate decarboxylase subunit alpha -
  MGAS9429_RS04950 (MGAS9429_Spy1012) citC 968457..969509 (-) 1053 WP_002989752.1 [citrate (pro-3S)-lyase] ligase -
  MGAS9429_RS04955 (MGAS9429_Spy1013) - 969598..970080 (-) 483 WP_002984600.1 PASTA domain-containing protein -
  MGAS9429_RS04960 (MGAS9429_Spy1015) xerS 970774..971844 (-) 1071 WP_044565073.1 tyrosine recombinase XerS Machinery gene
  MGAS9429_RS04965 (MGAS9429_Spy1016) - 972314..973012 (+) 699 WP_002989749.1 XRE family transcriptional regulator -
  MGAS9429_RS04970 (MGAS9429_Spy1017) ffh 973147..974709 (-) 1563 WP_024623383.1 signal recognition particle protein -
  MGAS9429_RS04975 (MGAS9429_Spy1018) - 974724..975056 (-) 333 WP_002989745.1 putative DNA-binding protein -
  MGAS9429_RS04980 (MGAS9429_Spy1019) - 975154..975852 (-) 699 WP_002989743.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41458.57 Da        Isoelectric Point: 9.5552

>NTDB_id=25639 MGAS9429_RS04960 WP_044565073.1 970774..971844(-) (xerS) [Streptococcus pyogenes MGAS9429]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKTALDNL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=25639 MGAS9429_RS04960 WP_044565073.1 970774..971844(-) (xerS) [Streptococcus pyogenes MGAS9429]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTATAAGGCCATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAGTTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAACTGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4)

(33-122)

Phage integrase family (Phage_integrase)

(177-344)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q1JLL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.337

100

0.803

Multiple sequence alignment