Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CVD07_RS05590 Genome accession   NZ_CP024897
Coordinates   1085405..1085596 (+) Length   63 a.a.
NCBI ID   WP_100261693.1    Uniprot ID   -
Organism   Bacillus velezensis strain CN026     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1080405..1090596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVD07_RS05555 (CVD07_05560) argF 1081256..1082227 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  CVD07_RS05560 (CVD07_05565) - 1082303..1082482 (+) 180 WP_003155070.1 YjzC family protein -
  CVD07_RS05565 (CVD07_05570) - 1082519..1082704 (-) 186 WP_007409129.1 YjzD family protein -
  CVD07_RS05575 (CVD07_05580) - 1082965..1083699 (+) 735 WP_014417405.1 hypothetical protein -
  CVD07_RS05580 (CVD07_05585) - 1083782..1084348 (+) 567 WP_032863798.1 hypothetical protein -
  CVD07_RS05585 (CVD07_05590) med 1084439..1085392 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  CVD07_RS05590 (CVD07_05595) comZ 1085405..1085596 (+) 192 WP_100261693.1 ComZ family protein Regulator
  CVD07_RS05595 (CVD07_05600) - 1085625..1085843 (-) 219 WP_007409123.1 hypothetical protein -
  CVD07_RS05600 (CVD07_05605) - 1086011..1086949 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CVD07_RS05605 (CVD07_05610) fabF 1086972..1088210 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  CVD07_RS05610 (CVD07_05615) - 1088294..1089079 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  CVD07_RS05615 (CVD07_05620) - 1089253..1090239 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7233.36 Da        Isoelectric Point: 4.2259

>NTDB_id=256232 CVD07_RS05590 WP_100261693.1 1085405..1085596(+) (comZ) [Bacillus velezensis strain CN026]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMTEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=256232 CVD07_RS05590 WP_100261693.1 1085405..1085596(+) (comZ) [Bacillus velezensis strain CN026]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGACGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778

Multiple sequence alignment