Detailed information NTG0025598

Bioinformatically predicted

Overview

• Name: pepF
• Type: Regulator
• Locus tag: LSL_RS02555
• Genome accession: NC_007929
• Coordinates: 444695..446512 (+)
• Length: 605 a.a.
• NCBI ID: WP_011475734.1
• Uniprot ID: Q1WUX7
• Organism: Ligilactobacillus salivarius UCC118
• Function: degradation of XIP; competence shut-off (predicted from homology) Competence regulation

Genomic Context

Location: 439695..451512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSL_RS02540 (LSL_0395)	-	441138..442784 (+)	1647	WP_011475732.1	phosphoenolpyruvate carboxykinase (ATP)	-
LSL_RS02545 (LSL_0396)	-	442888..443649 (+)	762	WP_004563829.1	adaptor protein MecA	-
LSL_RS02550 (LSL_0397)	-	443698..444597 (+)	900	WP_011475733.1	competence protein CoiA	-
LSL_RS02555 (LSL_0398)	pepF	444695..446512 (+)	1818	WP_011475734.1	oligoendopeptidase F	Regulator
LSL_RS02560 (LSL_0399)	-	446602..447198 (-)	597	WP_162853479.1	ClpXP adapter SpxH family protein	-
LSL_RS02565 (LSL_0400)	-	447375..448229 (+)	855	WP_003701554.1	phosphate ABC transporter substrate-binding protein	-
LSL_RS02570 (LSL_0401)	pstC	448240..449157 (+)	918	WP_003702917.1	phosphate ABC transporter permease subunit PstC	-
LSL_RS02575 (LSL_0402)	pstA	449157..450047 (+)	891	WP_011475735.1	phosphate ABC transporter permease PstA	-
LSL_RS02580 (LSL_0403)	pstB	450052..450846 (+)	795	WP_003702915.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 605 a.a.
• Molecular weight: 70587.73 Da
• Isoelectric Point: 5.5454

>NTDB_id=25598 LSL_RS02555 WP_011475734.1 444695..446512(+) (pepF) [Ligilactobacillus salivarius UCC118]
MSEKKAKRLLQRNEVPEELTWDLTKVFKSDEEFEKEYQTVKDEVQNFRKLQGTMDQGSQRFLQIIENFLSINRKFEKVYV
YASMRNDQDTTNAKYQGYNEMVDALAAEFSESISWFEPELLELDEDKLKQYFVEKKELKQYEHLIESMLVMRKHTLDKKS
ESLLAGASDIFGTSQNVFGILNNADLKFPIVKDDNGDDIQLSHGVYGKLIESTNRKVRKAAFKGLYSVYDQFKHTMATTL
IGNVKVHNFKARVRNYKDAREAATTSNHIPTEVYDVLLEQVHKNLPLLHRYVKLRKKILGVDELHMYDMYTPLTEDSKLT
YNYIQAQIEAKKALEVLGMDYLTHVSEAFENRWIDVVENKGKRSGAYSSGVYDTPPYILLNWQDNLENLFTLVHEMGHSM
HSYYTSHNQPYQYGDYPIFLAEIASTTNENILTDYLLKNNDEKEILIYILNHYLDGFKGTVYRQTQFAEFEKWIHEQNSK
GVPLTAKSISEYYLELNKKYYGNDVVSDPEIALEWARIPHFYYNFYVYQYATGFAAATTLAENILSGDENKLNKYLTYLK
AGSSKYPLEVMKDAGVDMTDSSYLEKAFKVFEERLNQLETLLSEK

Nucleotide

• Length: 1818 bp

>NTDB_id=25598 LSL_RS02555 WP_011475734.1 444695..446512(+) (pepF) [Ligilactobacillus salivarius UCC118]
ATGTCTGAAAAGAAAGCAAAAAGATTACTTCAGAGAAATGAAGTTCCAGAAGAATTAACGTGGGATTTAACAAAAGTATT
TAAAAGTGATGAAGAGTTTGAAAAGGAATACCAAACTGTAAAAGATGAGGTACAGAACTTCAGAAAATTACAAGGTACAA
TGGATCAAGGTAGTCAAAGATTTTTACAAATCATTGAAAATTTCTTAAGTATTAATAGGAAATTTGAAAAAGTTTATGTA
TATGCAAGTATGAGAAATGATCAAGATACTACAAACGCTAAGTATCAAGGATATAATGAAATGGTTGATGCATTAGCTGC
TGAATTTTCAGAATCTATATCCTGGTTCGAACCTGAGTTACTAGAATTAGATGAAGATAAATTAAAGCAATATTTTGTAG
AAAAAAAAGAATTAAAACAGTATGAACATTTAATTGAGAGTATGTTGGTCATGAGAAAGCATACGCTTGATAAAAAAAGT
GAGTCTTTATTAGCTGGAGCTAGTGATATCTTTGGGACATCGCAAAATGTTTTTGGCATTTTAAACAACGCAGATCTAAA
GTTTCCAATAGTAAAAGATGATAATGGTGATGATATTCAATTATCGCATGGTGTTTATGGAAAATTAATAGAATCTACAA
ATAGGAAAGTTAGAAAAGCTGCATTCAAGGGATTATACAGTGTTTATGACCAATTTAAGCATACAATGGCGACAACATTA
ATTGGAAATGTTAAGGTGCATAACTTTAAAGCAAGAGTTCGTAATTATAAAGATGCTAGAGAAGCTGCCACAACATCTAA
TCATATTCCAACAGAAGTCTATGATGTATTACTGGAACAAGTACACAAAAATCTTCCATTATTACATCGCTATGTAAAGC
TTAGAAAGAAAATATTAGGTGTCGATGAACTCCATATGTATGATATGTATACACCGTTAACTGAAGATAGTAAGCTTACT
TATAATTATATTCAAGCGCAAATTGAAGCAAAAAAGGCACTTGAAGTATTGGGAATGGATTATTTAACGCACGTTAGTGA
AGCATTTGAAAATCGTTGGATAGATGTAGTTGAAAATAAAGGAAAGAGAAGTGGAGCATATTCATCAGGAGTTTATGATA
CTCCGCCATATATCTTATTAAATTGGCAAGATAATTTAGAAAATCTTTTTACCTTGGTACATGAGATGGGACATAGTATG
CATAGTTATTACACTAGTCATAATCAACCCTATCAGTATGGAGATTACCCAATATTTTTGGCAGAAATAGCTTCAACTAC
TAATGAAAATATTTTGACGGATTATCTATTAAAGAATAACGATGAAAAAGAGATATTAATCTATATTTTAAATCATTATT
TAGATGGATTTAAAGGTACGGTATATCGTCAAACACAATTTGCAGAATTTGAAAAATGGATTCATGAACAGAATTCAAAA
GGAGTACCACTAACTGCTAAATCAATTTCTGAATATTACTTAGAATTAAATAAGAAATATTATGGCAATGATGTAGTAAG
CGATCCTGAGATAGCTTTAGAGTGGGCTAGAATTCCGCATTTTTATTATAATTTCTATGTTTATCAATATGCGACAGGAT
TTGCAGCAGCAACTACTTTAGCTGAAAATATTTTATCTGGCGATGAAAATAAATTAAACAAATATTTAACTTACTTAAAA
GCTGGTAGTAGTAAATATCCATTGGAAGTCATGAAAGATGCAGGTGTGGATATGACAGATTCTTCATATTTGGAGAAAGC
ATTTAAAGTTTTTGAAGAAAGATTAAATCAATTAGAGACATTATTGTCAGAAAAATAA

Domains

Predicted by InterproScan.

• Peptidase family M3 (Peptidase_M3) (209-589)

• Oligopeptidase F (Peptidase_M3_N) (119-188)

3D structure

• AlphaFold DB: Q1WUX7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pepF	Streptococcus salivarius strain HSISS4	53.209	97.851	0.521