Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CSC52_RS13535 Genome accession   NZ_CP029658
Coordinates   2535998..2536801 (-) Length   267 a.a.
NCBI ID   WP_110184268.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR_0467     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2530998..2541801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC52_RS13510 (CSC52_2543) metG 2531295..2533268 (-) 1974 WP_001051136.1 methionine--tRNA ligase -
  CSC52_RS13515 (CSC52_2544) rsmI 2533553..2534392 (-) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CSC52_RS13520 (CSC52_2545) - 2534394..2534642 (-) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  CSC52_RS13525 (CSC52_2546) - 2534635..2535360 (-) 726 WP_000910686.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  CSC52_RS13530 (CSC52_2547) yabA 2535634..2535981 (-) 348 WP_110184267.1 DNA replication initiation control protein YabA -
  CSC52_RS13535 (CSC52_2548) yaaT 2535998..2536801 (-) 804 WP_110184268.1 stage 0 sporulation family protein Regulator
  CSC52_RS13540 (CSC52_2549) - 2536802..2537728 (-) 927 WP_110184269.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  CSC52_RS13545 (CSC52_2550) - 2537942..2538271 (-) 330 WP_000781979.1 cyclic-di-AMP receptor -
  CSC52_RS13550 (CSC52_2551) tmk 2538299..2538916 (-) 618 WP_001272126.1 dTMP kinase -
  CSC52_RS13555 (CSC52_2552) - 2538918..2540255 (-) 1338 WP_000812829.1 aminotransferase class V-fold PLP-dependent enzyme -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30212.90 Da        Isoelectric Point: 4.5801

>NTDB_id=255877 CSC52_RS13535 WP_110184268.1 2535998..2536801(-) (yaaT) [Staphylococcus aureus strain AR_0467]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDILREQGLDMRLVNCEYTLDKSKVILNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=255877 CSC52_RS13535 WP_110184268.1 2535998..2536801(-) (yaaT) [Staphylococcus aureus strain AR_0467]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTTTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTAAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

61.597

98.502

0.607

Multiple sequence alignment