Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CSC52_RS12525 Genome accession   NZ_CP029658
Coordinates   2338904..2339578 (-) Length   224 a.a.
NCBI ID   WP_108720618.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR_0467     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2333904..2344578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC52_RS12510 (CSC52_2354) vraG 2335087..2336976 (-) 1890 WP_110184254.1 ABC transporter permease VraG -
  CSC52_RS12515 (CSC52_2355) vraF 2336966..2337727 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  CSC52_RS12520 (CSC52_2356) graS 2337871..2338911 (-) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  CSC52_RS12525 (CSC52_2357) braR 2338904..2339578 (-) 675 WP_108720618.1 response regulator transcription factor GraR/ApsR Regulator
  CSC52_RS12530 (CSC52_2358) graX 2339594..2340517 (-) 924 WP_000802953.1 auxiliary protein GraX/ApsX -
  CSC52_RS12535 (CSC52_2359) - 2340630..2341136 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CSC52_RS12540 (CSC52_2360) - 2341345..2341773 (-) 429 WP_000198504.1 hypothetical protein -
  CSC52_RS12550 (CSC52_2361) - 2342102..2343145 (-) 1044 WP_110184255.1 alpha/beta hydrolase -
  CSC52_RS12555 (CSC52_2362) - 2343296..2344363 (-) 1068 WP_000980137.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26064.93 Da        Isoelectric Point: 4.4488

>NTDB_id=255872 CSC52_RS12525 WP_108720618.1 2338904..2339578(-) (braR) [Staphylococcus aureus strain AR_0467]
MQILLVEDDNTLFQKLKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=255872 CSC52_RS12525 WP_108720618.1 2338904..2339578(-) (braR) [Staphylococcus aureus strain AR_0467]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAAAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397

Multiple sequence alignment