Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   CUC15_RS07640 Genome accession   NZ_CP024848
Coordinates   1515404..1517215 (+) Length   603 a.a.
NCBI ID   WP_114916090.1    Uniprot ID   A0A345PFL3
Organism   Oceanobacillus zhaokaii strain 160     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1510404..1522215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUC15_RS07620 (CUC15_07605) - 1511449..1512021 (+) 573 WP_114916086.1 GNAT family N-acetyltransferase -
  CUC15_RS07625 (CUC15_07610) spxA 1512304..1512699 (+) 396 WP_114916087.1 transcriptional regulator SpxA -
  CUC15_RS07630 (CUC15_07615) mecA 1513228..1513896 (+) 669 WP_114916088.1 adaptor protein MecA -
  CUC15_RS07635 (CUC15_07620) - 1514078..1515271 (+) 1194 WP_114916089.1 competence protein CoiA family protein -
  CUC15_RS07640 (CUC15_07625) pepF 1515404..1517215 (+) 1812 WP_114916090.1 oligoendopeptidase F Regulator
  CUC15_RS20250 - 1517545..1517721 (-) 177 WP_205317671.1 hypothetical protein -
  CUC15_RS07645 (CUC15_07630) - 1518103..1518993 (-) 891 WP_114916091.1 ClpXP adapter SpxH family protein -
  CUC15_RS07650 (CUC15_07635) - 1519012..1519398 (-) 387 WP_114916092.1 globin -
  CUC15_RS07655 (CUC15_07640) - 1519488..1520057 (-) 570 WP_114916093.1 CYTH domain-containing protein -
  CUC15_RS07660 (CUC15_07645) - 1520202..1520810 (+) 609 WP_114916094.1 GTP pyrophosphokinase family protein -
  CUC15_RS07665 (CUC15_07650) - 1520840..1521649 (+) 810 WP_114916095.1 NAD kinase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 69252.68 Da        Isoelectric Point: 4.7282

>NTDB_id=255870 CUC15_RS07640 WP_114916090.1 1515404..1517215(+) (pepF) [Oceanobacillus zhaokaii strain 160]
MAKSTKELPKRSEIAESLTWKLEDIFASDDQWSEELKSLQVAIPEVSKYQGKLGGSADTLFELLKLQDTLSERLGKLYTY
SHMRYDQDTTNSFYQEMNSQAETVLTLASSTMSFVVPEILAMDEGKIDAFLEEKEELRLYKKVLDEITRQRPHILSEREE
VLLAEVSEPLSTASQTFSMLNNADLTFPSVKNEDGEEVDLTHGRYSKFLESKNRQVRKDAFKAMYDTYGKFKNTFASTLS
GNVKVHNFSAKIRNYDSARQSALDNNNIPESVYDNLVEAVNEKLPLLHRYTKLRKKVLGLDELHMYDLYTSLVQDLDMKV
SYDEAKEYVLKGLAPLGSEYSEILKEAFSNRWIDVEENKGKRSGAYSSGAYGTNPYILLNWQDDVNNTFTLAHELGHSVH
SYYTRKSQPYRYGNYSIFVAEVASTCNEALLNEYLINNLDDEKQKLYILNHFLEGFRGTVFRQTMFAEFEHDIHVRAQNG
EALTADKLTEIYYELNKKYYGEDVVSDEEIGLEWARIPHFYYNYYVYQYATGYSAATSLANQILTEGESAVERYLNFLKA
GSSDFPIEVLKKAGVDMTSKQPILNALDVFEEKLNEMEKILLG

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=255870 CUC15_RS07640 WP_114916090.1 1515404..1517215(+) (pepF) [Oceanobacillus zhaokaii strain 160]
ATGGCAAAATCGACAAAAGAATTACCAAAACGTAGTGAAATAGCAGAATCATTAACATGGAAATTAGAAGATATATTTGC
AAGTGATGATCAATGGTCAGAAGAGTTAAAGAGTTTACAAGTAGCAATTCCTGAAGTATCAAAATATCAAGGGAAATTGG
GGGGATCTGCGGACACGCTATTTGAATTGTTGAAGCTCCAAGATACTCTTTCTGAGAGACTAGGAAAGCTATATACATAT
TCACATATGCGATATGATCAGGATACAACGAATTCATTCTATCAAGAAATGAATTCTCAAGCAGAAACGGTACTTACATT
AGCATCAAGTACAATGAGCTTTGTTGTCCCAGAGATTCTTGCAATGGATGAAGGTAAAATTGATGCTTTCTTAGAAGAAA
AAGAAGAACTGAGATTGTATAAGAAAGTATTAGATGAAATTACAAGACAGCGCCCACATATATTAAGTGAGCGTGAGGAA
GTATTGCTGGCAGAAGTATCAGAGCCACTTTCAACTGCATCACAAACATTTAGTATGTTAAATAATGCAGACTTAACGTT
CCCATCGGTTAAAAATGAGGATGGGGAAGAGGTTGATTTAACACATGGACGATATAGTAAATTCTTAGAATCAAAAAATC
GCCAGGTGCGTAAGGATGCTTTTAAAGCAATGTATGATACGTACGGAAAATTCAAGAATACATTCGCATCAACGCTTAGT
GGAAATGTAAAGGTTCATAATTTCTCTGCAAAGATTCGAAATTACGATTCCGCACGACAATCAGCATTAGACAACAATAA
TATTCCTGAGTCTGTGTACGATAATTTGGTAGAAGCAGTAAATGAAAAATTACCATTATTACATCGCTATACGAAATTAC
GGAAAAAAGTTTTAGGATTAGACGAGCTTCATATGTATGATCTCTATACATCGCTTGTACAGGATTTAGATATGAAGGTT
TCTTATGATGAAGCAAAGGAATATGTATTGAAAGGACTAGCTCCACTTGGAAGTGAATATAGTGAAATCTTGAAAGAAGC
ATTTAGTAATCGCTGGATTGATGTTGAAGAAAATAAAGGTAAGCGAAGTGGAGCGTATTCATCAGGTGCATATGGCACAA
ATCCATATATCCTGCTTAACTGGCAGGATGATGTGAATAACACTTTTACGTTAGCACATGAGCTTGGACATTCGGTGCAT
AGCTATTATACAAGAAAATCACAGCCATACCGTTATGGCAACTATTCCATATTCGTTGCAGAGGTTGCATCTACATGTAA
TGAAGCATTGCTGAATGAATACCTAATAAATAATTTAGATGATGAGAAACAAAAGCTTTATATTCTTAATCACTTCCTGG
AAGGTTTTCGTGGAACGGTATTCCGTCAAACAATGTTTGCTGAATTTGAACATGATATTCATGTGAGAGCACAAAACGGT
GAAGCATTAACAGCGGATAAACTTACTGAAATATATTATGAGCTAAATAAGAAATATTATGGTGAAGATGTTGTATCTGA
CGAAGAAATTGGCTTAGAATGGGCGAGAATTCCCCATTTTTACTATAATTATTATGTGTATCAATATGCGACAGGATACT
CTGCTGCAACATCACTAGCGAACCAAATTCTAACAGAAGGCGAAAGTGCGGTTGAACGCTATCTTAACTTCTTAAAAGCC
GGAAGCAGTGATTTTCCAATTGAAGTACTGAAAAAAGCAGGCGTTGATATGACATCGAAACAACCGATTTTAAATGCGCT
TGATGTATTTGAAGAAAAGCTAAATGAAATGGAAAAAATATTATTAGGATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(118-187)

Peptidase family M3 (Peptidase_M3)

(209-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345PFL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.577

98.01

0.486

Multiple sequence alignment