Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CUC15_RS02705 Genome accession   NZ_CP024848
Coordinates   523557..524510 (+) Length   317 a.a.
NCBI ID   WP_114915248.1    Uniprot ID   A0A345PD74
Organism   Oceanobacillus zhaokaii strain 160     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 518557..529510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUC15_RS02680 (CUC15_02680) rsgA 518619..519677 (+) 1059 WP_114915243.1 ribosome small subunit-dependent GTPase A -
  CUC15_RS02685 (CUC15_02685) - 519894..520433 (-) 540 WP_114915244.1 HD domain-containing protein -
  CUC15_RS02690 (CUC15_02690) - 520718..521260 (+) 543 WP_114915245.1 2TM domain-containing protein -
  CUC15_RS02695 (CUC15_02695) fni 521339..522394 (+) 1056 WP_114915246.1 type 2 isopentenyl-diphosphate Delta-isomerase -
  CUC15_RS02700 (CUC15_02700) - 522534..523256 (+) 723 WP_114915247.1 DsbA family oxidoreductase -
  CUC15_RS02705 (CUC15_02705) ceuB 523557..524510 (+) 954 WP_114915248.1 ABC transporter permease Machinery gene
  CUC15_RS02710 (CUC15_02710) - 524500..525450 (+) 951 WP_114915249.1 iron chelate uptake ABC transporter family permease subunit -
  CUC15_RS02715 (CUC15_02715) - 525444..526199 (+) 756 WP_114915250.1 ABC transporter ATP-binding protein -
  CUC15_RS02720 (CUC15_02720) - 526647..527615 (+) 969 WP_114915251.1 siderophore ABC transporter substrate-binding protein -
  CUC15_RS02725 (CUC15_02725) - 527921..528631 (+) 711 WP_162800253.1 SurA N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34803.13 Da        Isoelectric Point: 9.7576

>NTDB_id=255862 CUC15_RS02705 WP_114915248.1 523557..524510(+) (ceuB) [Oceanobacillus zhaokaii strain 160]
MKIWYLVLALIVLSVTSIFIGVSDVALLDLFSLTDEQIQILMVSRVPRLISIVIAGMSMSIVGLIMQQLSRNRFVSPTTA
GTMDAARLGVLISLMIFTSATPLQKMSVSFVFALLGTVIFMKILEKIKFKDAVFIPLVGLMFGNIISSISTFIAYQNDLI
QNMSSFMQGDFSMIMSGNYELMFVSIPVLIIAYLFANKFTIAGMGEDFSKNLGLNYRQVVNIGLIISALVTASVILSVGV
IPFLGLIVPNIVTIYLGDNLKKTLIHTALLGAVFVLVCDIIGRIIIYPYEIPISLTVGVIGSAIFIYLLIRRRKYGI

Nucleotide


Download         Length: 954 bp        

>NTDB_id=255862 CUC15_RS02705 WP_114915248.1 523557..524510(+) (ceuB) [Oceanobacillus zhaokaii strain 160]
ATGAAGATATGGTATTTAGTATTAGCACTTATTGTTCTTTCTGTAACGTCTATTTTTATAGGTGTTTCTGATGTTGCGTT
ACTCGATTTATTTAGCTTAACAGATGAACAAATACAGATTTTAATGGTTAGTAGAGTACCAAGGTTAATCAGCATTGTCA
TCGCTGGAATGAGTATGAGTATTGTTGGCTTAATTATGCAGCAGCTGAGCAGAAATCGCTTTGTATCGCCTACAACCGCG
GGAACAATGGATGCAGCGAGACTTGGAGTACTTATCTCATTGATGATTTTTACATCGGCTACACCATTGCAAAAAATGTC
AGTATCGTTTGTCTTTGCGCTTTTAGGTACGGTTATCTTTATGAAGATATTAGAAAAAATAAAGTTCAAGGATGCTGTAT
TTATTCCACTTGTCGGATTAATGTTTGGTAATATCATTAGCTCTATCTCTACATTTATCGCATATCAGAATGATCTTATT
CAGAATATGTCTTCCTTTATGCAGGGCGACTTTTCAATGATCATGAGTGGAAATTATGAATTAATGTTTGTTAGTATCCC
GGTTCTAATTATCGCCTATCTATTCGCAAATAAGTTTACGATTGCGGGTATGGGTGAGGATTTCTCAAAAAACCTAGGAT
TAAATTATCGGCAAGTCGTAAATATCGGCTTGATTATCAGTGCACTTGTTACAGCCTCCGTTATACTTTCGGTTGGTGTT
ATTCCTTTCTTAGGGTTAATCGTACCGAATATCGTAACCATTTATTTAGGTGATAACTTGAAGAAAACATTAATACATAC
AGCATTGCTAGGTGCGGTATTTGTACTTGTTTGCGATATTATCGGCAGAATTATCATTTATCCTTATGAAATTCCAATTA
GTTTAACCGTTGGGGTAATAGGTAGTGCAATCTTCATCTATCTATTGATAAGGAGAAGAAAGTATGGCATATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345PD74

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.376

98.107

0.524

Multiple sequence alignment