Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | CTW00_RS05960 | Genome accession | NZ_CP024843 |
| Coordinates | 1220299..1222101 (+) | Length | 600 a.a. |
| NCBI ID | WP_003100091.1 | Uniprot ID | A0A1J0MY34 |
| Organism | Streptococcus iniae strain FP5228 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1215299..1227101
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTW00_RS05935 (CTW00_01205) | - | 1215569..1216720 (+) | 1152 | WP_037583624.1 | MFS transporter | - |
| CTW00_RS05940 (CTW00_01206) | - | 1216844..1218019 (-) | 1176 | WP_003099060.1 | IS256 family transposase | - |
| CTW00_RS05945 | - | 1218115..1218327 (+) | 213 | WP_003101132.1 | competence protein CoiA family protein | - |
| CTW00_RS05955 (CTW00_01209) | - | 1219575..1220273 (+) | 699 | Protein_1113 | competence protein CoiA family protein | - |
| CTW00_RS05960 (CTW00_01210) | pepF | 1220299..1222101 (+) | 1803 | WP_003100091.1 | oligoendopeptidase F | Regulator |
| CTW00_RS05965 (CTW00_01211) | - | 1222103..1222756 (+) | 654 | WP_003100092.1 | HAD-IA family hydrolase | - |
| CTW00_RS05970 (CTW00_01212) | - | 1222792..1223436 (+) | 645 | WP_003100094.1 | HAD family phosphatase | - |
| CTW00_RS05975 (CTW00_01213) | - | 1223607..1224314 (+) | 708 | WP_003100096.1 | O-methyltransferase | - |
| CTW00_RS05980 (CTW00_01214) | prsA | 1224378..1225319 (+) | 942 | WP_003100098.1 | peptidylprolyl isomerase PrsA | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 69719.83 Da Isoelectric Point: 5.0039
>NTDB_id=255825 CTW00_RS05960 WP_003100091.1 1220299..1222101(+) (pepF) [Streptococcus iniae strain FP5228]
MSDNRSHLEEKYTWDLSTIFASDRDWEMELNVLVKQVEEAKKWAGHLVESASNLLTITEIELDLSRRIETVYVYAHMKND
QDTTVAKYQEYQAKASALYAKFSEVFSFYEPEFMALEADKFQQFLKEESKLNDYRHFFDKLLHSKKHVLSQAEEELLAGA
QEIFNGAEETFSIFDNADVIFPTVMDDKGQEVEITHGNFISLMESKNRKVRQDAYEGLYSTYEQFQHTYAKTLQTNVKVQ
NFKARVHKYDSARHAAMSANFIPESVYDTLLTAVHKHLPLLHRYLKLRQEILGLNQLKMYDVYTPLSATDLSIPYDQAIE
KAEKVLSIFGDEYAKHVHHAFADRWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDNLDNMFTLVHETGHSLHSTFTRQT
QPYVYGDYSIFLAEIASTTNENILTEALLNEVEDDKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQNGQVLTSEF
LNTLYADLNEKYYGLSKEDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLANKIVHGEQEDINRYLDYLKAGNSDYPL
NVIAKAGVDMTNETYLNEAFAVFEERLTELEKLVEKGAHL
MSDNRSHLEEKYTWDLSTIFASDRDWEMELNVLVKQVEEAKKWAGHLVESASNLLTITEIELDLSRRIETVYVYAHMKND
QDTTVAKYQEYQAKASALYAKFSEVFSFYEPEFMALEADKFQQFLKEESKLNDYRHFFDKLLHSKKHVLSQAEEELLAGA
QEIFNGAEETFSIFDNADVIFPTVMDDKGQEVEITHGNFISLMESKNRKVRQDAYEGLYSTYEQFQHTYAKTLQTNVKVQ
NFKARVHKYDSARHAAMSANFIPESVYDTLLTAVHKHLPLLHRYLKLRQEILGLNQLKMYDVYTPLSATDLSIPYDQAIE
KAEKVLSIFGDEYAKHVHHAFADRWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDNLDNMFTLVHETGHSLHSTFTRQT
QPYVYGDYSIFLAEIASTTNENILTEALLNEVEDDKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQNGQVLTSEF
LNTLYADLNEKYYGLSKEDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLANKIVHGEQEDINRYLDYLKAGNSDYPL
NVIAKAGVDMTNETYLNEAFAVFEERLTELEKLVEKGAHL
Nucleotide
Download Length: 1803 bp
>NTDB_id=255825 CTW00_RS05960 WP_003100091.1 1220299..1222101(+) (pepF) [Streptococcus iniae strain FP5228]
ATGTCAGATAATCGTAGCCATTTAGAAGAAAAATATACTTGGGATTTAAGCACTATTTTTGCTAGTGATAGAGACTGGGA
AATGGAGCTTAATGTACTTGTTAAGCAAGTAGAAGAAGCTAAAAAATGGGCAGGACATTTAGTAGAGTCTGCTAGTAATT
TATTAACTATTACTGAGATTGAGTTGGACTTGTCACGAAGAATTGAGACTGTCTATGTCTATGCTCATATGAAAAATGAC
CAGGATACTACTGTAGCCAAATATCAAGAATACCAAGCAAAAGCATCGGCTTTATATGCTAAATTTAGTGAAGTCTTTTC
ATTTTATGAACCAGAATTTATGGCACTTGAAGCAGATAAGTTTCAACAATTCCTTAAAGAAGAATCAAAATTAAATGATT
ATAGACATTTCTTTGACAAACTGTTACATAGTAAAAAGCATGTTTTGTCTCAAGCAGAAGAAGAGCTATTGGCTGGTGCA
CAAGAAATTTTTAATGGTGCTGAAGAAACATTTAGTATTTTTGACAATGCCGATGTGATTTTTCCAACAGTTATGGATGA
CAAAGGCCAAGAAGTGGAAATCACGCATGGAAACTTTATCAGTTTGATGGAATCCAAAAACCGTAAGGTGCGTCAAGATG
CTTATGAAGGTCTTTATAGTACCTATGAACAATTCCAACACACTTATGCTAAAACATTGCAAACAAATGTTAAGGTTCAA
AATTTCAAAGCACGTGTTCATAAATATGATTCAGCTCGTCATGCAGCTATGTCAGCAAACTTTATTCCAGAATCTGTTTA
TGATACTCTTCTAACAGCAGTTCATAAGCATTTGCCACTGTTACATCGTTATTTAAAGCTACGCCAGGAAATTCTCGGTC
TTAATCAGTTAAAAATGTATGATGTCTACACGCCACTTTCTGCAACAGATTTATCGATTCCTTATGATCAAGCTATTGAA
AAAGCAGAAAAAGTCTTATCTATTTTTGGTGACGAATATGCTAAACATGTTCATCATGCTTTTGCAGATCGTTGGATTGA
TGTGCATGTTAATAAAGGAAAACGTTCAGGTGCCTATTCAGGTGGTTCATATGATACGAATGCCTTTATGCTCTTGAATT
GGCAAGATAATTTGGATAATATGTTTACTCTGGTTCACGAGACTGGTCATAGTTTACATTCAACCTTTACTCGTCAAACA
CAGCCTTATGTTTATGGTGATTATAGTATTTTCTTGGCGGAGATTGCTTCAACGACTAATGAAAATATTCTGACAGAAGC
TTTATTGAATGAGGTAGAAGACGACAAAGAGCGTTTTGCAATTTTAAATCATTATCTTGATGGTTTCCGTGGAACTGTTT
TCCGTCAGACACAATTTGCTGAATTTGAACATGCTATTCATCAAGCAGATCAAAATGGACAAGTGCTTACAAGTGAATTC
CTTAACACCCTTTATGCTGATTTAAATGAAAAGTATTATGGCTTATCTAAAGAAGACAACCATTTTATTCAATACGAATG
GGCTCGTATTCCTCATTTCTATTACAATTACTATGTTTACCAATATGCAACTGGCTTTGCTGCGGCTAGCTATTTAGCCA
ATAAAATTGTTCATGGTGAGCAAGAAGACATAAACCGTTATTTAGACTATCTTAAAGCTGGAAATTCGGATTACCCATTA
AATGTTATTGCTAAGGCTGGTGTTGATATGACGAATGAGACTTACCTTAACGAAGCATTTGCAGTTTTTGAGGAACGTTT
AACTGAACTTGAAAAACTGGTTGAAAAAGGTGCGCATTTGTAA
ATGTCAGATAATCGTAGCCATTTAGAAGAAAAATATACTTGGGATTTAAGCACTATTTTTGCTAGTGATAGAGACTGGGA
AATGGAGCTTAATGTACTTGTTAAGCAAGTAGAAGAAGCTAAAAAATGGGCAGGACATTTAGTAGAGTCTGCTAGTAATT
TATTAACTATTACTGAGATTGAGTTGGACTTGTCACGAAGAATTGAGACTGTCTATGTCTATGCTCATATGAAAAATGAC
CAGGATACTACTGTAGCCAAATATCAAGAATACCAAGCAAAAGCATCGGCTTTATATGCTAAATTTAGTGAAGTCTTTTC
ATTTTATGAACCAGAATTTATGGCACTTGAAGCAGATAAGTTTCAACAATTCCTTAAAGAAGAATCAAAATTAAATGATT
ATAGACATTTCTTTGACAAACTGTTACATAGTAAAAAGCATGTTTTGTCTCAAGCAGAAGAAGAGCTATTGGCTGGTGCA
CAAGAAATTTTTAATGGTGCTGAAGAAACATTTAGTATTTTTGACAATGCCGATGTGATTTTTCCAACAGTTATGGATGA
CAAAGGCCAAGAAGTGGAAATCACGCATGGAAACTTTATCAGTTTGATGGAATCCAAAAACCGTAAGGTGCGTCAAGATG
CTTATGAAGGTCTTTATAGTACCTATGAACAATTCCAACACACTTATGCTAAAACATTGCAAACAAATGTTAAGGTTCAA
AATTTCAAAGCACGTGTTCATAAATATGATTCAGCTCGTCATGCAGCTATGTCAGCAAACTTTATTCCAGAATCTGTTTA
TGATACTCTTCTAACAGCAGTTCATAAGCATTTGCCACTGTTACATCGTTATTTAAAGCTACGCCAGGAAATTCTCGGTC
TTAATCAGTTAAAAATGTATGATGTCTACACGCCACTTTCTGCAACAGATTTATCGATTCCTTATGATCAAGCTATTGAA
AAAGCAGAAAAAGTCTTATCTATTTTTGGTGACGAATATGCTAAACATGTTCATCATGCTTTTGCAGATCGTTGGATTGA
TGTGCATGTTAATAAAGGAAAACGTTCAGGTGCCTATTCAGGTGGTTCATATGATACGAATGCCTTTATGCTCTTGAATT
GGCAAGATAATTTGGATAATATGTTTACTCTGGTTCACGAGACTGGTCATAGTTTACATTCAACCTTTACTCGTCAAACA
CAGCCTTATGTTTATGGTGATTATAGTATTTTCTTGGCGGAGATTGCTTCAACGACTAATGAAAATATTCTGACAGAAGC
TTTATTGAATGAGGTAGAAGACGACAAAGAGCGTTTTGCAATTTTAAATCATTATCTTGATGGTTTCCGTGGAACTGTTT
TCCGTCAGACACAATTTGCTGAATTTGAACATGCTATTCATCAAGCAGATCAAAATGGACAAGTGCTTACAAGTGAATTC
CTTAACACCCTTTATGCTGATTTAAATGAAAAGTATTATGGCTTATCTAAAGAAGACAACCATTTTATTCAATACGAATG
GGCTCGTATTCCTCATTTCTATTACAATTACTATGTTTACCAATATGCAACTGGCTTTGCTGCGGCTAGCTATTTAGCCA
ATAAAATTGTTCATGGTGAGCAAGAAGACATAAACCGTTATTTAGACTATCTTAAAGCTGGAAATTCGGATTACCCATTA
AATGTTATTGCTAAGGCTGGTGTTGATATGACGAATGAGACTTACCTTAACGAAGCATTTGCAGTTTTTGAGGAACGTTT
AACTGAACTTGAAAAACTGGTTGAAAAAGGTGCGCATTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
70.667 |
100 |
0.707 |