Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CUZ62_RS04985 Genome accession   NZ_CP024809
Coordinates   1037503..1038549 (+) Length   348 a.a.
NCBI ID   WP_059767274.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain 83131A     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1032503..1043549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUZ62_RS04960 (CUZ62_04980) map 1033363..1034115 (+) 753 WP_011275369.1 type I methionyl aminopeptidase -
  CUZ62_RS04965 (CUZ62_04985) - 1034240..1035097 (-) 858 WP_011275370.1 SDR family oxidoreductase -
  CUZ62_RS04970 (CUZ62_04990) - 1035169..1036181 (-) 1013 Protein_983 HoxN/HupN/NixA family nickel/cobalt transporter -
  CUZ62_RS04975 (CUZ62_04995) - 1036394..1036780 (+) 387 WP_011275373.1 hypothetical protein -
  CUZ62_RS04980 (CUZ62_05000) liaF 1036805..1037506 (+) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  CUZ62_RS04985 (CUZ62_05005) vraS 1037503..1038549 (+) 1047 WP_059767274.1 sensor histidine kinase Regulator
  CUZ62_RS04990 (CUZ62_05010) vraR 1038539..1039168 (+) 630 WP_011275376.1 two-component system response regulator VraR Regulator
  CUZ62_RS04995 (CUZ62_05015) - 1039232..1040443 (-) 1212 WP_011275377.1 YihY/virulence factor BrkB family protein -
  CUZ62_RS05000 (CUZ62_05020) - 1040640..1040924 (-) 285 WP_011275378.1 YtxH domain-containing protein -
  CUZ62_RS05005 (CUZ62_05025) - 1040930..1041394 (-) 465 WP_011275379.1 low molecular weight protein-tyrosine-phosphatase -
  CUZ62_RS05010 (CUZ62_05030) - 1041536..1041745 (+) 210 WP_011275380.1 DUF1128 domain-containing protein -
  CUZ62_RS05015 (CUZ62_05035) - 1041759..1043006 (+) 1248 WP_011275381.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40193.61 Da        Isoelectric Point: 6.0550

>NTDB_id=255570 CUZ62_RS04985 WP_059767274.1 1037503..1038549(+) (vraS) [Staphylococcus haemolyticus strain 83131A]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDLYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIENERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=255570 CUZ62_RS04985 WP_059767274.1 1037503..1038549(+) (vraS) [Staphylococcus haemolyticus strain 83131A]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAATCATCATTTTACTTTGTATTATAGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATTGAGCATGCCATTGAAGGAGAAACAGTAGGTATCAATGATCAAAACATTGAGCTCTATAACGAAACCATAGATCT
TTATCAAACATTAGTTCCTCTAAATCAAGAGTTGCACCGTTTACGAATGAAAACGCAAAACTTAACTAATGAAAATTACA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGAATGAACGACAGAGATTAGCTCGCGAGTTACATGACTCTGTAAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCTATAAAAGAAACAAAATTAGAGGCACCGCTTGATCAACAAATACC
AGTTTTAGAGAAAATGGTTCAGGAATCTCAACTTGAAATGCGCGCATTATTACTTCATTTGAGACCTTTAGGACTAAAAG
ATAAATCACTAGGGGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTCAAGGTTCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCTAATGGAACTAAAGTCACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAGG
GATTCAATGTTGACGAGAAATTAGAACAAAGTTATGGATTAAAAAATATGAGAGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTTTCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCATTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.931

99.713

0.917


Multiple sequence alignment