Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CSC56_RS06405 Genome accession   NZ_CP029652
Coordinates   1199928..1200731 (-) Length   267 a.a.
NCBI ID   WP_001134191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR_0471     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1194928..1205731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC56_RS06380 (CSC56_1169) metG 1195225..1197198 (-) 1974 WP_001051142.1 methionine--tRNA ligase -
  CSC56_RS06385 (CSC56_1170) rsmI 1197483..1198322 (-) 840 WP_000279924.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CSC56_RS06390 (CSC56_1171) - 1198324..1198572 (-) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  CSC56_RS06395 (CSC56_1172) - 1198565..1199290 (-) 726 WP_000910685.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  CSC56_RS06400 (CSC56_1173) yabA 1199564..1199911 (-) 348 WP_000375687.1 DNA replication initiation control protein YabA -
  CSC56_RS06405 (CSC56_1174) yaaT 1199928..1200731 (-) 804 WP_001134191.1 stage 0 sporulation family protein Regulator
  CSC56_RS06410 (CSC56_1175) - 1200732..1201658 (-) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  CSC56_RS06415 (CSC56_1176) - 1201872..1202201 (-) 330 WP_000781979.1 cyclic-di-AMP receptor -
  CSC56_RS06420 (CSC56_1177) tmk 1202229..1202846 (-) 618 WP_001272125.1 dTMP kinase -
  CSC56_RS06425 (CSC56_1178) - 1202848..1204185 (-) 1338 WP_103152027.1 aminotransferase class V-fold PLP-dependent enzyme -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5759

>NTDB_id=255494 CSC56_RS06405 WP_001134191.1 1199928..1200731(-) (yaaT) [Staphylococcus aureus strain AR_0471]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=255494 CSC56_RS06405 WP_001134191.1 1199928..1200731(-) (yaaT) [Staphylococcus aureus strain AR_0471]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCACTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCAGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGTGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCACAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618

Multiple sequence alignment