Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CUB85_RS07810 Genome accession   NZ_CP024797
Coordinates   1460827..1461423 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain TJ02     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1455827..1466423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUB85_RS07780 - 1456040..1456495 (+) 456 WP_038463794.1 flavodoxin -
  CUB85_RS07785 dapD 1456577..1457287 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CUB85_RS07790 - 1457358..1458482 (+) 1125 WP_038463797.1 N-acetyldiaminopimelate deacetylase -
  CUB85_RS07795 - 1458543..1458788 (+) 246 WP_003154596.1 YkuS family protein -
  CUB85_RS07800 - 1458822..1459628 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  CUB85_RS07805 - 1459916..1460374 (+) 459 WP_038463805.1 TlpA disulfide reductase family protein -
  CUB85_RS07810 rok 1460827..1461423 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  CUB85_RS07815 - 1461447..1462439 (-) 993 WP_043021218.1 hypothetical protein -
  CUB85_RS07820 - 1462585..1463187 (+) 603 WP_076424045.1 molybdenum cofactor guanylyltransferase -
  CUB85_RS07825 - 1463239..1464258 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  CUB85_RS07830 glp 1464276..1465568 (+) 1293 WP_077391926.1 gephyrin-like molybdotransferase Glp -
  CUB85_RS07835 mobB 1465529..1466050 (+) 522 WP_094031685.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=255492 CUB85_RS07810 WP_012117447.1 1460827..1461423(+) (rok) [Bacillus velezensis strain TJ02]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=255492 CUB85_RS07810 WP_012117447.1 1460827..1461423(+) (rok) [Bacillus velezensis strain TJ02]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTTCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment