Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CUB85_RS07710 Genome accession   NZ_CP024797
Coordinates   1444962..1445426 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain TJ02     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1439962..1450426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUB85_RS07685 - 1440443..1442263 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  CUB85_RS07690 - 1442244..1443457 (-) 1214 Protein_1446 aminotransferase A -
  CUB85_RS20600 - 1443658..1443819 (-) 162 WP_007409608.1 hypothetical protein -
  CUB85_RS07705 cheV 1444008..1444919 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  CUB85_RS07710 kre 1444962..1445426 (-) 465 WP_003154622.1 YkyB family protein Regulator
  CUB85_RS07715 - 1445549..1446841 (-) 1293 WP_015239757.1 MFS transporter -
  CUB85_RS07720 - 1446917..1447411 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  CUB85_RS07725 - 1447486..1448349 (-) 864 WP_038463786.1 metallophosphoesterase -
  CUB85_RS07730 fadH 1448494..1449258 (+) 765 WP_038463789.1 2,4-dienoyl-CoA reductase -
  CUB85_RS07735 - 1449397..1449918 (+) 522 WP_100001409.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=255491 CUB85_RS07710 WP_003154622.1 1444962..1445426(-) (kre) [Bacillus velezensis strain TJ02]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=255491 CUB85_RS07710 WP_003154622.1 1444962..1445426(-) (kre) [Bacillus velezensis strain TJ02]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment