Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CSC56_RS05405 Genome accession   NZ_CP029652
Coordinates   1003184..1003858 (-) Length   224 a.a.
NCBI ID   WP_001166504.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR_0471     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 998184..1008858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC56_RS05390 (CSC56_0982) - 999364..1001253 (-) 1890 WP_000009403.1 ABC transporter permease -
  CSC56_RS05395 (CSC56_0983) vraF 1001243..1002004 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  CSC56_RS05400 (CSC56_0984) graS 1002151..1003191 (-) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  CSC56_RS05405 (CSC56_0985) braR 1003184..1003858 (-) 675 WP_001166504.1 response regulator transcription factor GraR/ApsR Regulator
  CSC56_RS05410 (CSC56_0986) graX 1003874..1004797 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  CSC56_RS05415 (CSC56_0987) - 1004910..1005416 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CSC56_RS05420 (CSC56_0988) - 1005627..1006055 (-) 429 WP_000198504.1 hypothetical protein -
  CSC56_RS05430 (CSC56_0989) - 1006384..1007427 (-) 1044 WP_001030756.1 alpha/beta hydrolase -
  CSC56_RS05435 (CSC56_0990) - 1007578..1008645 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26034.86 Da        Isoelectric Point: 4.3968

>NTDB_id=255489 CSC56_RS05405 WP_001166504.1 1003184..1003858(-) (braR) [Staphylococcus aureus strain AR_0471]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAVETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=255489 CSC56_RS05405 WP_001166504.1 1003184..1003858(-) (braR) [Staphylococcus aureus strain AR_0471]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAGTTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402