Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   CUB85_RS06420 Genome accession   NZ_CP024797
Coordinates   1214406..1215062 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain TJ02     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1209406..1220062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUB85_RS06395 oppF 1209935..1210852 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  CUB85_RS06400 - 1210959..1212146 (+) 1188 WP_052248589.1 putative glycoside hydrolase -
  CUB85_RS06405 - 1212264..1212842 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  CUB85_RS06410 spx 1213021..1213416 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  CUB85_RS06415 - 1213474..1214130 (-) 657 WP_015239570.1 TerC family protein -
  CUB85_RS06420 mecA 1214406..1215062 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  CUB85_RS06425 - 1215213..1216373 (+) 1161 WP_069006905.1 competence protein CoiA family protein -
  CUB85_RS06430 pepF 1216601..1218430 (+) 1830 WP_094031915.1 oligoendopeptidase F Regulator
  CUB85_RS20580 - 1218468..1218635 (-) 168 WP_003155026.1 hypothetical protein -
  CUB85_RS06440 spxH 1218921..1219823 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=255487 CUB85_RS06420 WP_003155032.1 1214406..1215062(+) (mecA) [Bacillus velezensis strain TJ02]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=255487 CUB85_RS06420 WP_003155032.1 1214406..1215062(+) (mecA) [Bacillus velezensis strain TJ02]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGATGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895


Multiple sequence alignment