Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CUB85_RS06315 Genome accession   NZ_CP024797
Coordinates   1193109..1193300 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain TJ02     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1188109..1198300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUB85_RS06280 argF 1188961..1189932 (+) 972 WP_094031642.1 ornithine carbamoyltransferase -
  CUB85_RS06285 - 1190008..1190187 (+) 180 WP_003155070.1 YjzC family protein -
  CUB85_RS06290 - 1190224..1190409 (-) 186 WP_007409129.1 YjzD family protein -
  CUB85_RS06300 - 1190670..1191404 (+) 735 WP_080130436.1 hypothetical protein -
  CUB85_RS06305 - 1191487..1192053 (+) 567 WP_007409126.1 hypothetical protein -
  CUB85_RS06310 med 1192143..1193096 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  CUB85_RS06315 comZ 1193109..1193300 (+) 192 WP_003155061.1 ComZ family protein Regulator
  CUB85_RS06320 - 1193329..1193547 (-) 219 WP_007409123.1 hypothetical protein -
  CUB85_RS06325 - 1193714..1194652 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CUB85_RS06330 fabF 1194675..1195913 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  CUB85_RS06335 - 1195997..1196782 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  CUB85_RS06340 - 1196956..1197942 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=255484 CUB85_RS06315 WP_003155061.1 1193109..1193300(+) (comZ) [Bacillus velezensis strain TJ02]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=255484 CUB85_RS06315 WP_003155061.1 1193109..1193300(+) (comZ) [Bacillus velezensis strain TJ02]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment