Detailed information NTG0255471

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CUB85_RS02400
• Genome accession: NZ_CP024797
• Coordinates: 450494..451642 (+)
• Length: 382 a.a.
• NCBI ID: WP_012116798.1
• Uniprot ID: A3KLC9
• Organism: Bacillus velezensis strain TJ02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 445494..456642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CUB85_RS02380	-	445891..446574 (-)	684	WP_100001209.1	ABC transporter ATP-binding protein	-
CUB85_RS02385	-	446589..448025 (-)	1437	WP_076425710.1	ABC transporter permease	-
CUB85_RS02390	-	448238..448921 (+)	684	WP_007410267.1	response regulator transcription factor	-
CUB85_RS02395	-	448908..450341 (+)	1434	WP_162492834.1	sensor histidine kinase	-
CUB85_RS02400	rapC	450494..451642 (+)	1149	WP_012116798.1	Rap family tetratricopeptide repeat protein	Regulator
CUB85_RS02405	phrC	451626..451745 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
CUB85_RS02410	-	451893..452003 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
CUB85_RS02415	-	452083..453447 (-)	1365	WP_094031502.1	aspartate kinase	-
CUB85_RS02420	ceuB	453861..454814 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
CUB85_RS02425	-	454804..455751 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
CUB85_RS02430	-	455745..456503 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45490.68 Da
• Isoelectric Point: 4.9916

>NTDB_id=255471 CUB85_RS02400 WP_012116798.1 450494..451642(+) (rapC) [Bacillus velezensis strain TJ02]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRAQYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=255471 CUB85_RS02400 WP_012116798.1 450494..451642(+) (rapC) [Bacillus velezensis strain TJ02]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCAGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

3D structure

• AlphaFold DB: A3KLC9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	56.842	99.476	0.565