Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   CUC43_RS15820 Genome accession   NZ_CP024771
Coordinates   2939450..2940133 (+) Length   227 a.a.
NCBI ID   WP_000350711.1    Uniprot ID   A0A2B0Y2P9
Organism   Bacillus thuringiensis LM1212     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2934450..2945133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUC43_RS15800 (CUC43_16305) - 2935531..2937178 (+) 1648 Protein_2983 peptide ABC transporter substrate-binding protein -
  CUC43_RS15805 (CUC43_16310) - 2937207..2937410 (-) 204 WP_000559980.1 hypothetical protein -
  CUC43_RS15810 (CUC43_16320) spx 2938003..2938398 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  CUC43_RS15815 (CUC43_16325) - 2938448..2939122 (-) 675 WP_029437842.1 TerC family protein -
  CUC43_RS15820 (CUC43_16330) mecA 2939450..2940133 (+) 684 WP_000350711.1 adaptor protein MecA Regulator
  CUC43_RS15825 (CUC43_16335) - 2940206..2941750 (+) 1545 WP_029437843.1 cardiolipin synthase -
  CUC43_RS15830 (CUC43_16340) - 2941831..2943075 (+) 1245 WP_029437844.1 competence protein CoiA family protein -
  CUC43_RS15835 (CUC43_16345) pepF 2943126..2944952 (+) 1827 WP_029437845.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26965.02 Da        Isoelectric Point: 3.9986

>NTDB_id=255375 CUC43_RS15820 WP_000350711.1 2939450..2940133(+) (mecA) [Bacillus thuringiensis LM1212]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=255375 CUC43_RS15820 WP_000350711.1 2939450..2940133(+) (mecA) [Bacillus thuringiensis LM1212]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGGGTAGATAAAATTATAGACATTCCTTTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCCTTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGACCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACCATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2B0Y2P9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568


Multiple sequence alignment