Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   DLJ56_RS03075 Genome accession   NZ_CP029629
Coordinates   604932..605402 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain MOK063     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 599932..610402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ56_RS03040 (DLJ56_03040) - 599971..600384 (+) 414 WP_001123303.1 DUF393 domain-containing protein -
  DLJ56_RS03045 (DLJ56_03045) - 600584..601027 (+) 444 WP_000070866.1 Dps family protein -
  DLJ56_RS03050 (DLJ56_03050) deoD 601148..601858 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  DLJ56_RS03055 (DLJ56_03055) deoC 602173..602835 (+) 663 WP_001083324.1 deoxyribose-phosphate aldolase -
  DLJ56_RS03065 (DLJ56_03065) - 603115..604416 (+) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  DLJ56_RS03070 (DLJ56_03070) - 604430..604780 (+) 351 WP_001024035.1 membrane protein -
  DLJ56_RS03075 (DLJ56_03075) luxS 604932..605402 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  DLJ56_RS03080 (DLJ56_03080) - 605713..606897 (+) 1185 WP_001291497.1 M20 family metallopeptidase -
  DLJ56_RS03085 (DLJ56_03085) - 606897..608090 (+) 1194 WP_070001902.1 ATP-grasp domain-containing protein -
  DLJ56_RS03090 (DLJ56_03090) - 608489..609160 (+) 672 WP_000120550.1 DUF2750 domain-containing protein -
  DLJ56_RS03095 (DLJ56_03095) coaW 609290..610093 (-) 804 WP_000862727.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=255271 DLJ56_RS03075 WP_000164421.1 604932..605402(-) (luxS) [Staphylococcus aureus strain MOK063]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=255271 DLJ56_RS03075 WP_000164421.1 604932..605402(-) (luxS) [Staphylococcus aureus strain MOK063]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404