Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   DLJ55_RS03670 Genome accession   NZ_CP029627
Coordinates   713193..713867 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain MOK042     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 708193..718867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ55_RS03640 (DLJ55_03640) - 708408..709475 (+) 1068 WP_000980137.1 membrane protein -
  DLJ55_RS03645 (DLJ55_03645) - 709626..710669 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  DLJ55_RS03655 (DLJ55_03655) - 710998..711426 (+) 429 WP_000198504.1 hypothetical protein -
  DLJ55_RS03660 (DLJ55_03660) - 711635..712141 (-) 507 WP_110166305.1 GNAT family N-acetyltransferase -
  DLJ55_RS03665 (DLJ55_03665) graX 712254..713177 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  DLJ55_RS03670 (DLJ55_03670) braR 713193..713867 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  DLJ55_RS03675 (DLJ55_03675) graS 713860..714900 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  DLJ55_RS03680 (DLJ55_03680) vraF 715044..715805 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  DLJ55_RS03685 (DLJ55_03685) vraG 715795..717684 (+) 1890 WP_000143611.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=255187 DLJ55_RS03670 WP_001166505.1 713193..713867(+) (braR) [Staphylococcus aureus strain MOK042]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=255187 DLJ55_RS03670 WP_001166505.1 713193..713867(+) (braR) [Staphylococcus aureus strain MOK042]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402


Multiple sequence alignment