Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   DMA15_RS27945 Genome accession   NZ_CP029617
Coordinates   6241684..6242469 (-) Length   261 a.a.
NCBI ID   WP_125515498.1    Uniprot ID   -
Organism   Streptomyces sp. WAC 01529     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6236684..6247469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DMA15_RS27930 (DMA15_27905) - 6236803..6237600 (+) 798 WP_125515496.1 GNAT family N-acetyltransferase -
  DMA15_RS27935 (DMA15_27910) - 6237669..6239558 (+) 1890 WP_240659956.1 IucA/IucC family siderophore biosynthesis protein -
  DMA15_RS27940 (DMA15_27915) - 6239599..6241578 (+) 1980 WP_125515497.1 ATP-dependent DNA helicase -
  DMA15_RS27945 (DMA15_27920) dinR/lexA 6241684..6242469 (-) 786 WP_125515498.1 transcriptional repressor LexA Regulator
  DMA15_RS27950 (DMA15_27925) nrdR 6242976..6243518 (+) 543 WP_125515499.1 transcriptional regulator NrdR -
  DMA15_RS27955 (DMA15_27930) - 6243657..6246560 (+) 2904 WP_125515500.1 vitamin B12-dependent ribonucleotide reductase -
  DMA15_RS27960 (DMA15_27935) - 6246656..6247240 (-) 585 WP_276314374.1 TerD family protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28253.95 Da        Isoelectric Point: 7.4236

>NTDB_id=255079 DMA15_RS27945 WP_125515498.1 6241684..6242469(-) (dinR/lexA) [Streptomyces sp. WAC 01529]
MTTTADSATITAQDRSQSRLEPVHAMNDAAANQEGPKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=255079 DMA15_RS27945 WP_125515498.1 6241684..6242469(-) (dinR/lexA) [Streptomyces sp. WAC 01529]
GTGACCACCACCGCAGACAGCGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCGAGCCGGTGCATGCCATGAA
TGACGCAGCCGCGAACCAGGAGGGGCCCAAGCCCACGCGCTCCCTGCCAGGGCGACCTCCAGGCATCCGCGCCGACAGCT
CGGGACTCACCGACCGGCAACGCCGGGTGATCGAGGTCATCCGGGACTCCGTGCAGCGGCGCGGCTACCCACCGTCCATG
CGGGAGATCGGTCAGGCGGTGGGGCTCTCCAGCACCTCCTCGGTCGCCCATCAGCTGATGGCCCTGGAGCGCAAGGGCTT
CCTCCGCCGCGACCCTCACCGCCCGCGGGCCTACGAGGTGCGCGGCTCGGACCAGCCGAGCAGCCAGCCCACCGACACCA
CCGGCAAGCCCGCCGCTTCGTACGTCCCGCTCGTCGGCCGCATCGCGGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTG
GAGGACGTCTTCCCTCTCCCCCGGCAGCTCGTGGGCGACGGCGAGCTCTTCGTACTGAAGGTCGTCGGTGACTCGATGAT
CGAGGCCGCGATCTGTGACGGGGACTGGGTCACGGTCCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCGTGGCCGCCA
TGCTGGACGGCGAAGCCACGGTCAAGCGTTTCAAGCGCGAGGACGGGCACGTCTGGCTGCTCCCGCACAACTCCGCGTAC
CAGCCGATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTCGTGGCGGTGCTGCGGCGGGTATGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(143-255)

LexA DNA binding domain (LexA_DNA_bind)

(54-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

81.226

0.379