Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DL538_RS18620 Genome accession   NZ_CP029609
Coordinates   3551148..3551861 (-) Length   237 a.a.
NCBI ID   WP_033883478.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain G7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3546148..3556861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DL538_RS18600 (DL538_18495) ghrB 3546292..3547269 (+) 978 WP_131228141.1 D-glycerate dehydrogenase -
  DL538_RS18605 (DL538_18500) psdB 3547307..3549247 (-) 1941 WP_131228142.1 lantibiotic ABC transporter permease PsdB -
  DL538_RS18610 (DL538_18505) psdA 3549222..3550001 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  DL538_RS18615 (DL538_18510) psdS 3550084..3551154 (-) 1071 WP_131228143.1 two-component sensor histidine kinase PsdS -
  DL538_RS18620 (DL538_18515) braR 3551148..3551861 (-) 714 WP_033883478.1 two-component system response regulator PsdR Regulator
  DL538_RS18625 (DL538_18520) yvzJ 3552008..3552217 (+) 210 WP_003243327.1 lipoprotein -
  DL538_RS18630 (DL538_18525) yvcN 3552253..3553017 (-) 765 WP_106073365.1 arylamine N-acetyltransferase -
  DL538_RS18635 (DL538_18530) crh 3553018..3553275 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  DL538_RS18640 (DL538_18535) whiA 3553299..3554249 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  DL538_RS18645 (DL538_18540) mgfK 3554272..3555225 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  DL538_RS18650 (DL538_18545) rapZ 3555227..3556114 (-) 888 WP_003243903.1 RNase adapter RapZ -
  DL538_RS18655 (DL538_18550) rppI 3556139..3556615 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27502.33 Da        Isoelectric Point: 4.6062

>NTDB_id=254989 DL538_RS18620 WP_033883478.1 3551148..3551861(-) (braR) [Bacillus subtilis subsp. subtilis strain G7]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=254989 DL538_RS18620 WP_033883478.1 3551148..3551861(-) (braR) [Bacillus subtilis subsp. subtilis strain G7]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment