Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DL538_RS15900 Genome accession   NZ_CP029609
Coordinates   3056127..3056822 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis subsp. subtilis strain G7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3051127..3061822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DL538_RS15880 (DL538_15795) yttA 3051554..3052300 (+) 747 WP_131227866.1 LMBR1 domain-containing protein -
  DL538_RS15885 (DL538_15800) bceB 3052337..3054277 (-) 1941 WP_029726910.1 bacitracin ABC transporter permease BceB -
  DL538_RS15890 (DL538_15805) bceA 3054267..3055028 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  DL538_RS15895 (DL538_15810) bceS 3055130..3056134 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  DL538_RS15900 (DL538_15815) braR 3056127..3056822 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  DL538_RS15905 (DL538_15820) ytrF 3056919..3058229 (-) 1311 WP_038427856.1 ABC transporter permease YtrF -
  DL538_RS15910 (DL538_15825) ytrE 3058219..3058914 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  DL538_RS15915 (DL538_15830) ytrD 3058929..3059906 (-) 978 WP_131227868.1 ABC transporter permease YtrD -
  DL538_RS15920 (DL538_15835) ytrC 3059936..3060922 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  DL538_RS15925 (DL538_15840) ytrB 3060916..3061794 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=254979 DL538_RS15900 WP_004399109.1 3056127..3056822(-) (braR) [Bacillus subtilis subsp. subtilis strain G7]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=254979 DL538_RS15900 WP_004399109.1 3056127..3056822(-) (braR) [Bacillus subtilis subsp. subtilis strain G7]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377