Detailed information NTG0254871

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: DL538_RS02075
• Genome accession: NZ_CP029609
• Coordinates: 357024..358145 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain G7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 352024..363145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DL538_RS02045 (DL538_02045)	ycdA	352029..353093 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
DL538_RS02050	-	353116..353247 (-)	132	WP_003246334.1	hypothetical protein	-
DL538_RS02055 (DL538_02050)	ycdB	353421..354842 (+)	1422	WP_131227090.1	YcdB/YcdC domain-containing protein	-
DL538_RS02065 (DL538_02060)	ycdC	355029..356390 (+)	1362	WP_088327401.1	YcdB/YcdC domain-containing protein	-
DL538_RS02070 (DL538_02065)	cwlK	356398..356901 (-)	504	WP_069322342.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
DL538_RS02075 (DL538_02070)	rapF	357024..358145 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
DL538_RS02080 (DL538_02075)	ycdF	358252..359028 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
DL538_RS02085 (DL538_02080)	ycdG	359053..360738 (+)	1686	WP_113713019.1	alpha-glucosidase	-
DL538_RS02090 (DL538_02085)	znuA	360926..361885 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
DL538_RS02095 (DL538_02090)	znuC	361940..362635 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=254871 DL538_RS02075 WP_015715201.1 357024..358145(+) (rapF) [Bacillus subtilis subsp. subtilis strain G7]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=254871 DL538_RS02075 WP_015715201.1 357024..358145(+) (rapF) [Bacillus subtilis subsp. subtilis strain G7]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATTTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAACTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405