Detailed information NTG0254868

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: DL538_RS01325
• Genome accession: NZ_CP029609
• Coordinates: 216160..217290 (+)
• Length: 376 a.a.
• NCBI ID: WP_131227033.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain G7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 211160..222290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DL538_RS01300 (DL538_01305)	-	212065..212343 (+)	279	WP_017696800.1	hemolysin XhlA family protein	-
DL538_RS01305 (DL538_01310)	-	212359..212622 (+)	264	WP_017696801.1	phage holin	-
DL538_RS01310 (DL538_01315)	-	212678..213652 (+)	975	WP_131227030.1	N-acetylmuramoyl-L-alanine amidase	-
DL538_RS01315 (DL538_01320)	-	213703..214167 (-)	465	WP_131227031.1	SMI1/KNR4 family protein	-
DL538_RS01320 (DL538_01325)	-	214188..215951 (-)	1764	WP_131227032.1	T7SS effector LXG polymorphic toxin	-
DL538_RS01325 (DL538_01330)	rapC	216160..217290 (+)	1131	WP_131227033.1	Rap family tetratricopeptide repeat protein	Regulator
DL538_RS22470	-	217290..217421 (+)	132	WP_284690764.1	hypothetical protein	-
DL538_RS01330 (DL538_01335)	-	217436..217651 (-)	216	WP_131227034.1	hypothetical protein	-
DL538_RS01335 (DL538_01340)	-	217758..217985 (+)	228	WP_017696808.1	hypothetical protein	-
DL538_RS01340 (DL538_01345)	-	217978..218190 (+)	213	WP_131227035.1	transcriptional regulator	-
DL538_RS01345 (DL538_01350)	-	218266..218928 (-)	663	WP_131227036.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44879.13 Da
• Isoelectric Point: 5.2930

>NTDB_id=254868 DL538_RS01325 WP_131227033.1 216160..217290(+) (rapC) [Bacillus subtilis subsp. subtilis strain G7]
MDQVLPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQEIEEMEEDQDLLVYYSLMCFRHQLMLDSLEPEDRYRDRPTVD
ELLEKIEKPQKRLTGLLKYYSLFFRGMYEFDHKEYVEAISYYRKAEEELTAVSDEMEQAEFHYKIADAYYQIDQHFVSLN
HLKKAKHLFEKNQLYKVKVIGCNMMFGANMYDMYRLTEAESYYREALSVAEGMSEKKAKRIIGVIFHNLGLVYLRTQNLS
AAEEHFKKAIDMKEHLDTVYGVRSLYMMANVLYQSNKPKEARFFYETALKRAEDSNEEEYMAKLKIINSIYEEYNETEVN
RSLDYLEKKRLWSDFAELAEKLGDFHYEQRNYAEGRSFLKRTIHAQTQILKVTEAI

Nucleotide

• Length: 1131 bp

>NTDB_id=254868 DL538_RS01325 WP_131227033.1 216160..217290(+) (rapC) [Bacillus subtilis subsp. subtilis strain G7]
ATGGACCAAGTTTTACCGTCATCCCGAGTGGGAGTCAAGATCAATGAATGGTATAAAATGATTCGTCAATTCAGTGTTCC
TGATGCAGAAATCTTAAAGGCGGAAGTGGAGCAAGAAATAGAGGAAATGGAAGAGGATCAAGATTTACTTGTTTATTATT
CATTGATGTGTTTCCGTCATCAATTGATGTTAGATTCATTGGAGCCAGAAGACAGATATCGGGATCGTCCTACAGTCGAT
GAACTACTTGAAAAAATAGAAAAACCGCAAAAAAGACTTACAGGCCTTTTAAAATATTACTCATTATTTTTCCGAGGGAT
GTATGAATTTGATCATAAAGAATACGTGGAAGCGATAAGTTATTATCGTAAAGCTGAGGAAGAATTGACTGCAGTTTCAG
ATGAAATGGAACAAGCTGAATTTCATTATAAAATAGCAGATGCCTACTATCAAATTGATCAGCATTTTGTTTCCCTGAAT
CATTTAAAAAAAGCTAAGCATTTGTTTGAAAAAAATCAATTGTATAAGGTGAAAGTGATCGGATGCAATATGATGTTTGG
AGCTAATATGTACGATATGTACCGGCTGACAGAGGCGGAATCATATTACCGAGAAGCTTTAAGTGTCGCTGAGGGAATGA
GTGAGAAAAAGGCAAAAAGGATCATTGGAGTGATCTTTCATAATTTAGGCTTAGTTTATTTAAGGACCCAAAACCTAAGT
GCAGCTGAAGAGCATTTTAAAAAAGCAATAGACATGAAAGAACATCTTGATACAGTGTATGGAGTAAGATCATTATATAT
GATGGCAAATGTACTTTACCAAAGCAACAAACCTAAGGAAGCACGTTTCTTTTATGAAACAGCTTTAAAACGGGCTGAAG
ATTCTAATGAAGAAGAATACATGGCGAAATTAAAGATCATTAATTCAATATATGAAGAATATAATGAAACAGAAGTAAAT
CGAAGCTTAGACTATTTGGAAAAGAAACGCCTGTGGTCTGATTTTGCAGAATTAGCAGAAAAATTGGGTGACTTTCATTA
TGAGCAAAGAAACTATGCAGAGGGAAGAAGCTTCTTAAAGAGAACTATACATGCACAAACACAAATACTTAAGGTTACGG
AGGCTATATAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (225-293)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	39.459	98.404	0.388