Detailed information NTG0254846

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CSW12_RS27325
• Genome accession: NZ_CP024655
• Coordinates: 5245638..5246765 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470755.1
• Uniprot ID: A0A160GV33
• Organism: Bacillus cereus strain MLY1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5240638..5251765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSW12_RS27295 (CSW12_27370)	spoIIIJ	5240678..5241445 (-)	768	WP_000727740.1	YidC family membrane integrase SpoIIIJ	-
CSW12_RS27300 (CSW12_27375)	rnpA	5241498..5241845 (-)	348	WP_000726621.1	ribonuclease P protein component	-
CSW12_RS27305 (CSW12_27380)	rpmH	5241922..5242056 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
CSW12_RS27310 (CSW12_27385)	dnaA	5242621..5243961 (+)	1341	WP_000428028.1	chromosomal replication initiator protein DnaA	-
CSW12_RS27315 (CSW12_27390)	dnaN	5244140..5245285 (+)	1146	WP_001212886.1	DNA polymerase III subunit beta	-
CSW12_RS27320 (CSW12_27395)	yaaA	5245413..5245625 (+)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
CSW12_RS27325 (CSW12_27400)	recF	5245638..5246765 (+)	1128	WP_000470755.1	DNA replication/repair protein RecF	Machinery gene
CSW12_RS27330 (CSW12_27405)	gyrB	5246805..5248727 (+)	1923	WP_000435980.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
CSW12_RS27335 (CSW12_27410)	gyrA	5248816..5251287 (+)	2472	WP_001282866.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43304.63 Da
• Isoelectric Point: 6.7809

>NTDB_id=254846 CSW12_RS27325 WP_000470755.1 5245638..5246765(+) (recF) [Bacillus cereus strain MLY1]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=254846 CSW12_RS27325 WP_000470755.1 5245638..5246765(+) (recF) [Bacillus cereus strain MLY1]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACCCTTCAACTAATTGA
GCATGGTGCAAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTACTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A160GV33

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651