Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CTT40_RS02420 | Genome accession | NZ_CP029605 |
| Coordinates | 488115..488480 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain 24Pae112 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 483115..493480
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTT40_RS02390 (CTT40_00468) | pyrR | 483737..484249 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| CTT40_RS02395 (CTT40_00469) | ruvX | 484361..484795 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CTT40_RS02400 (CTT40_00470) | - | 484795..485364 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CTT40_RS02405 (CTT40_00471) | - | 485413..486306 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| CTT40_RS02410 (CTT40_00472) | gshB | 486453..487406 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| CTT40_RS02415 (CTT40_00473) | pilG | 487661..488068 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CTT40_RS02420 (CTT40_00474) | pilH | 488115..488480 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CTT40_RS02425 (CTT40_00475) | - | 488531..489067 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CTT40_RS02430 (CTT40_00476) | pilJ | 489152..491200 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CTT40_RS02435 (CTT40_00477) | pilK | 491261..492136 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=254767 CTT40_RS02420 WP_003084587.1 488115..488480(+) (pilH) [Pseudomonas aeruginosa strain 24Pae112]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=254767 CTT40_RS02420 WP_003084587.1 488115..488480(+) (pilH) [Pseudomonas aeruginosa strain 24Pae112]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |