Detailed information NTG0254731

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: CS547_RS07420
• Genome accession: NZ_CP024647
• Coordinates: 1404333..1404617 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain Lzh-5
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1399333..1409617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS547_RS07395 (CS547_07395)	-	1400577..1401485 (+)	909	WP_022553408.1	ketopantoate reductase family protein	-
CS547_RS07400 (CS547_07400)	-	1401516..1402748 (-)	1233	WP_007409644.1	aminopeptidase	-
CS547_RS07405 (CS547_07405)	-	1402849..1402983 (-)	135	WP_003154559.1	protein YkpC	-
CS547_RS07410 (CS547_07410)	mreBH	1403055..1404062 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
CS547_RS07420 (CS547_07420)	abrB	1404333..1404617 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
CS547_RS07425 (CS547_07425)	-	1404790..1406094 (+)	1305	WP_014417634.1	ATP-binding protein	-
CS547_RS07430 (CS547_07430)	-	1406096..1406923 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase	-
CS547_RS07435 (CS547_07435)	ktrC	1406964..1407629 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
CS547_RS07440 (CS547_07440)	ade	1407778..1409511 (+)	1734	WP_022553404.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=254731 CS547_RS07420 WP_014417633.1 1404333..1404617(+) (abrB) [Bacillus velezensis strain Lzh-5]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=254731 CS547_RS07420 WP_014417633.1 1404333..1404617(+) (abrB) [Bacillus velezensis strain Lzh-5]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543