Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAOUHSC_02956 Genome accession   NC_007795
Coordinates   2718595..2719260 (-) Length   221 a.a.
NCBI ID   YP_501407.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2713595..2724260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_02950 - 2714065..2714178 (-) 114 YP_501402.1 hypothetical protein -
  SAOUHSC_02953 - 2714837..2716837 (-) 2001 YP_501404.1 permease domain-containing protein -
  SAOUHSC_02954 - 2716834..2717589 (-) 756 YP_501405.1 ABC transporter ATP-binding protein -
  SAOUHSC_02955 braS 2717697..2718584 (-) 888 YP_501406.1 nisin susceptibility-associated sensor histidine kinase Regulator
  SAOUHSC_02956 braR 2718595..2719260 (-) 666 YP_501407.1 nisin susceptibility-associated DNA-binding response regulator Regulator
  SAOUHSC_02957 - 2719286..2719486 (-) 201 YP_501408.1 hypothetical protein -
  SAOUHSC_02958 - 2719684..2721108 (+) 1425 YP_501410.1 alkaline phosphatase III -
  SAOUHSC_02960 - 2721178..2721288 (+) 111 YP_501411.1 hypothetical protein -
  SAOUHSC_02961 - 2721391..2721846 (-) 456 YP_501412.1 hypothetical protein -
  SAOUHSC_02962 - 2722091..2722852 (-) 762 YP_501413.1 tributyrin esterase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25392.45 Da        Isoelectric Point: 4.6846

>NTDB_id=25464 SAOUHSC_02956 YP_501407.1 2718595..2719260(-) (braR) [Staphylococcus aureus subsp. aureus NCTC 8325]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=25464 SAOUHSC_02956 YP_501407.1 2718595..2719260(-) (braR) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment