Detailed information NTG0254592

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CS557_RS07395
• Genome accession: NZ_CP024632
• Coordinates: 1546950..1547678 (+)
• Length: 242 a.a.
• NCBI ID: WP_228150900.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain lzh-X15
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1541950..1552678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS557_RS07360 (CS557_07370)	kdsB	1542142..1542903 (+)	762	WP_099948591.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CS557_RS07365 (CS557_07375)	-	1542905..1543891 (+)	987	WP_099948592.1	DNA polymerase III subunit delta'	-
CS557_RS07370 (CS557_07380)	-	1544118..1544462 (+)	345	WP_004954079.1	PilZ domain-containing protein	-
CS557_RS07375 (CS557_07385)	-	1544485..1545258 (+)	774	WP_004911519.1	TatD family hydrolase	-
CS557_RS07380 (CS557_07390)	-	1545297..1545905 (+)	609	WP_020899852.1	TetR/AcrR family transcriptional regulator	-
CS557_RS07385 (CS557_07395)	-	1545918..1546466 (+)	549	WP_039047968.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
CS557_RS07390 (CS557_07400)	xcpV	1546480..1546953 (+)	474	WP_228150905.1	type II secretion system minor pseudopilin GspI	Machinery gene
CS557_RS07395 (CS557_07405)	xcpW	1546950..1547678 (+)	729	WP_228150900.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CS557_RS07400 (CS557_07410)	gspK	1547675..1548634 (+)	960	WP_099948594.1	type II secretion system minor pseudopilin GspK	-
CS557_RS07405 (CS557_07415)	-	1548741..1549337 (+)	597	WP_099948595.1	6-pyruvoyl trahydropterin synthase family protein	-
CS557_RS07410 (CS557_07420)	ung	1549376..1550089 (+)	714	WP_099948596.1	uracil-DNA glycosylase	-
CS557_RS07415 (CS557_07425)	-	1550086..1551210 (+)	1125	WP_171053792.1	enoyl-CoA hydratase/isomerase family protein	-
CS557_RS07420 (CS557_07430)	tadA	1551217..1551720 (+)	504	WP_087539688.1	tRNA adenosine(34) deaminase TadA	-
CS557_RS07425 (CS557_07435)	-	1551787..1552227 (+)	441	WP_075696895.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27883.24 Da
• Isoelectric Point: 9.0889

>NTDB_id=254592 CS557_RS07395 WP_228150900.1 1546950..1547678(+) (xcpW) [Acinetobacter junii strain lzh-X15]
MKIKNVVMRLGFIFNVVSECQQSSTKPYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAGVSDPLKQGLSPYERIEYRYDVQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRIVILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNQET
PP

Nucleotide

• Length: 729 bp

>NTDB_id=254592 CS557_RS07395 WP_228150900.1 1546950..1547678(+) (xcpW) [Acinetobacter junii strain lzh-X15]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTTCATATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCAACTAAGCC
TTATTTACCAAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATTTTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTCTAAAAGATAGTATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGAGTATCTGATCCATTGAAGCAAGGTCTTT
CACCATATGAGCGAATAGAATACAGATATGATGTACAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACATTACTTGAAAATGTAGATCAATTTAGAATTGTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTGACGATTGCTGGTTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCAGGAAACT
CCACCATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	69.802	83.471	0.583