Detailed information    

insolico Bioinformatically predicted

Overview


Name   agrA   Type   Regulator
Locus tag   SAOUHSC_02265 Genome accession   NC_007795
Coordinates   2096006..2096632 (+) Length   208 a.a.
NCBI ID   YP_500746.1    Uniprot ID   Q2FWM4
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2091006..2101632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_02258 - 2091135..2091761 (+) 627 YP_500740.1 hypothetical protein -
  SAOUHSC_02259 - 2092122..2092907 (+) 786 YP_500741.1 hypothetical protein -
  SAOUHSC_02260 - 2093504..2093638 (-) 135 YP_500742.1 delta-hemolysin -
  SAOUHSC_02261 - 2093874..2094443 (+) 570 YP_500743.1 accessory gene regulator protein B -
  SAOUHSC_02262 - 2094440..2094580 (+) 141 YP_500744.1 hypothetical protein -
  SAOUHSC_02264 - 2094653..2095897 (+) 1245 YP_500745.1 accessory gene regulator protein C -
  SAOUHSC_02265 agrA 2096006..2096632 (+) 627 YP_500746.1 accessory gene regulator protein A Regulator
  SAOUHSC_02266 - 2096704..2096811 (+) 108 YP_500747.1 hypothetical protein -
  SAOUHSC_02267 - 2096999..2097958 (-) 960 YP_500748.1 fructokinase -
  SAOUHSC_02268 - 2097955..2099439 (-) 1485 YP_500749.1 sucrose-6-phosphate hydrolase -
  SAOUHSC_02269 - 2099588..2100538 (-) 951 YP_500750.1 sucrose operon repressor -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24253.54 Da        Isoelectric Point: 6.2955

>NTDB_id=25459 SAOUHSC_02265 YP_500746.1 2096006..2096632(+) (agrA) [Staphylococcus aureus subsp. aureus NCTC 8325]
MEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFK
DDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELS
QLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 627 bp        

>NTDB_id=25459 SAOUHSC_02265 YP_500746.1 2096006..2096632(+) (agrA) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAGGCTGTTACTT
TTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCAGTTGGTAACA
TTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTTTATTTTTAAA
GATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGTTGTCTAAAGA
TAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATGTTTTTTGAAT
CATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAAAGAACTGAGT
CAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAGATTCGAAAGA
GCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FWM4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1


Multiple sequence alignment