Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CTZ19_RS10520 | Genome accession | NZ_CP024613 |
| Coordinates | 2191459..2191839 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Ab4568 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2186459..2196839
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTZ19_RS10490 (CTZ19_10460) | tadA | 2186577..2187080 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| CTZ19_RS10495 (CTZ19_10465) | - | 2187087..2188211 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CTZ19_RS10500 (CTZ19_10470) | ung | 2188208..2188921 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| CTZ19_RS10505 (CTZ19_10475) | - | 2188972..2189568 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CTZ19_RS10510 (CTZ19_10480) | gspK | 2189799..2190758 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| CTZ19_RS10515 (CTZ19_10485) | xcpW | 2190758..2191459 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CTZ19_RS10520 (CTZ19_10490) | xcpV | 2191459..2191839 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CTZ19_RS10525 (CTZ19_10495) | - | 2191829..2192383 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| CTZ19_RS10530 (CTZ19_10500) | - | 2192393..2193001 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| CTZ19_RS10535 (CTZ19_10505) | - | 2193039..2193812 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| CTZ19_RS10540 (CTZ19_10510) | - | 2193830..2194171 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| CTZ19_RS10545 (CTZ19_10515) | - | 2194183..2195163 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| CTZ19_RS10550 (CTZ19_10520) | kdsB | 2195175..2195936 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=254352 CTZ19_RS10520 WP_000836911.1 2191459..2191839(-) (xcpV) [Acinetobacter baumannii strain Ab4568]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=254352 CTZ19_RS10520 WP_000836911.1 2191459..2191839(-) (xcpV) [Acinetobacter baumannii strain Ab4568]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |