Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SAOUHSC_00665 Genome accession   NC_007795
Coordinates   652088..652762 (+) Length   224 a.a.
NCBI ID   YP_499224.1    Uniprot ID   Q2G0E0
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 647088..657762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_00660 - 647303..648370 (+) 1068 YP_499218.1 hypothetical protein -
  SAOUHSC_00661 - 648521..649564 (+) 1044 YP_499219.1 hypothetical protein -
  SAOUHSC_00662 - 649893..650321 (+) 429 YP_499221.1 hypothetical protein -
  SAOUHSC_00663 - 650530..651036 (-) 507 YP_499222.1 hypothetical protein -
  SAOUHSC_00664 - 651149..652072 (+) 924 YP_499223.1 hypothetical protein -
  SAOUHSC_00665 braR 652088..652762 (+) 675 YP_499224.1 hypothetical protein Regulator
  SAOUHSC_00666 - 652755..653795 (+) 1041 YP_499225.1 hypothetical protein -
  SAOUHSC_00667 - 653939..654700 (+) 762 YP_499226.1 ABC transporter ATP-binding protein -
  SAOUHSC_00668 - 654690..656579 (+) 1890 YP_499227.1 ABC transporter permease -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=25432 SAOUHSC_00665 YP_499224.1 652088..652762(+) (braR) [Staphylococcus aureus subsp. aureus NCTC 8325]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=25432 SAOUHSC_00665 YP_499224.1 652088..652762(+) (braR) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2G0E0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402


Multiple sequence alignment