Detailed information NTG0254256

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CTZ20_RS10285
• Genome accession: NZ_CP024611
• Coordinates: 2157026..2157727 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain Ab4977
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2152026..2162727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTZ20_RS10255 (CTZ20_10225)	-	2152332..2152775 (-)	444	WP_001246675.1	SRPBCC family protein	-
CTZ20_RS10260 (CTZ20_10230)	tadA	2152845..2153348 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
CTZ20_RS10265 (CTZ20_10235)	-	2153355..2154479 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
CTZ20_RS10270 (CTZ20_10240)	ung	2154476..2155189 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
CTZ20_RS10275 (CTZ20_10245)	-	2155240..2155836 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
CTZ20_RS10280 (CTZ20_10250)	gspK	2156067..2157026 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
CTZ20_RS10285 (CTZ20_10255)	xcpW	2157026..2157727 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CTZ20_RS10290 (CTZ20_10260)	xcpV	2157727..2158107 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
CTZ20_RS10295 (CTZ20_10265)	-	2158097..2158651 (-)	555	WP_000841373.1	type II secretion system protein	-
CTZ20_RS10300 (CTZ20_10270)	-	2158661..2159269 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
CTZ20_RS10305 (CTZ20_10275)	-	2159307..2160080 (-)	774	WP_000497298.1	TatD family hydrolase	-
CTZ20_RS10310 (CTZ20_10280)	-	2160098..2160439 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
CTZ20_RS10315 (CTZ20_10285)	-	2160451..2161431 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
CTZ20_RS10320 (CTZ20_10290)	kdsB	2161443..2162204 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=254256 CTZ20_RS10285 WP_000594589.1 2157026..2157727(-) (xcpW) [Acinetobacter baumannii strain Ab4977]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=254256 CTZ20_RS10285 WP_000594589.1 2157026..2157727(-) (xcpW) [Acinetobacter baumannii strain Ab4977]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996