Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SAOUHSC_00342 Genome accession   NC_007795
Coordinates   356884..357729 (+) Length   281 a.a.
NCBI ID   YP_498932.1    Uniprot ID   Q2G118
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 351884..362729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_00339 - 352150..353991 (-) 1842 YP_498929.1 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase -
  SAOUHSC_00340 - 353960..355120 (-) 1161 YP_498930.1 trans-sulfuration enzyme family protein -
  SAOUHSC_00341 - 355117..356220 (-) 1104 YP_498931.1 hypothetical protein -
  SAOUHSC_00342 spo0J 356884..357729 (+) 846 YP_498932.1 ParB family chromosome partioning protein Regulator
  SAOUHSC_00344 - 357886..358767 (+) 882 YP_498933.1 hypothetical protein -
  SAOUHSC_00345 - 358797..359000 (+) 204 YP_498934.1 hypothetical protein -
  SAOUHSC_00346 - 359012..360109 (+) 1098 YP_498935.1 GTP-dependent nucleic acid-binding protein EngD -
  SAOUHSC_00347 - 360195..360386 (-) 192 YP_498936.1 hypothetical protein -
  SAOUHSC_00348 rpsF 360630..360926 (+) 297 YP_498937.1 30S ribosomal protein S6 -
  SAOUHSC_00349 ssbA 360947..361450 (+) 504 YP_498938.1 bacteriophage L54a single-stranded DNA binding protein Machinery gene
  SAOUHSC_00350 rpsR 361502..361744 (+) 243 YP_498939.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32855.86 Da        Isoelectric Point: 10.0091

>NTDB_id=25424 SAOUHSC_00342 YP_498932.1 356884..357729(+) (spo0J) [Staphylococcus aureus subsp. aureus NCTC 8325]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=25424 SAOUHSC_00342 YP_498932.1 356884..357729(+) (spo0J) [Staphylococcus aureus subsp. aureus NCTC 8325]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2G118

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384

Multiple sequence alignment