Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SAOUHSC_00024 Genome accession   NC_007795
Coordinates   29977..30777 (+) Length   266 a.a.
NCBI ID   YP_498630.1    Uniprot ID   Q2G2U5
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24977..35777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_00021 - 25645..27471 (+) 1827 YP_498627.1 sensory box histidine kinase VicK -
  SAOUHSC_00022 - 27515..28798 (+) 1284 YP_498628.1 hypothetical protein -
  SAOUHSC_00023 - 28799..29587 (+) 789 YP_498629.1 hypothetical protein -
  SAOUHSC_00024 vicX 29977..30777 (+) 801 YP_498630.1 hypothetical protein Regulator
  SAOUHSC_00025 - 31005..33323 (+) 2319 YP_498631.1 hypothetical protein -
  SAOUHSC_00026 - 33555..34034 (-) 480 YP_498632.1 hypothetical protein -
  SAOUHSC_00027 - 33691..34170 (+) 480 YP_498633.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SAOUHSC_00028 - 34375..34509 (-) 135 YP_498634.1 hypothetical protein -
  SAOUHSC_00029 - 34473..34565 (+) 93 YP_498635.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=25423 SAOUHSC_00024 YP_498630.1 29977..30777(+) (vicX) [Staphylococcus aureus subsp. aureus NCTC 8325]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=25423 SAOUHSC_00024 YP_498630.1 29977..30777(+) (vicX) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAAACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2G2U5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477

Multiple sequence alignment