Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DLJ52_RS06350 Genome accession   NZ_CP029559
Coordinates   1312924..1313406 (-) Length   160 a.a.
NCBI ID   WP_002961744.1    Uniprot ID   A0ABM6W620
Organism   Streptococcus sobrinus strain NIDR 6715-15     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1307924..1318406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ52_RS06335 (DLJ52_06335) alsS 1308656..1310329 (-) 1674 WP_021673388.1 acetolactate synthase AlsS -
  DLJ52_RS06340 (DLJ52_06340) - 1310533..1311759 (-) 1227 WP_002961741.1 CDC27 family protein -
  DLJ52_RS06345 (DLJ52_06345) - 1311749..1312915 (-) 1167 WP_019772463.1 AI-2E family transporter -
  DLJ52_RS06350 (DLJ52_06350) mutX 1312924..1313406 (-) 483 WP_002961744.1 8-oxo-dGTP diphosphatase Machinery gene
  DLJ52_RS06355 (DLJ52_06355) - 1313541..1314557 (+) 1017 WP_019786836.1 lactonase family protein -
  DLJ52_RS06360 (DLJ52_06360) - 1314757..1315569 (+) 813 WP_019785584.1 sugar phosphate isomerase/epimerase -
  DLJ52_RS06365 (DLJ52_06365) - 1315640..1315831 (+) 192 WP_002996627.1 hypothetical protein -
  DLJ52_RS06370 (DLJ52_06370) - 1316196..1317293 (-) 1098 WP_019785583.1 FAD-binding oxidoreductase -
  DLJ52_RS06375 (DLJ52_06375) - 1317301..1318124 (-) 824 Protein_1204 ZIP family metal transporter -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18662.02 Da        Isoelectric Point: 4.3732

>NTDB_id=254110 DLJ52_RS06350 WP_002961744.1 1312924..1313406(-) (mutX) [Streptococcus sobrinus strain NIDR 6715-15]
MTKLATICYIDNGKELLLMLRNKKPNDVHEGKWISVGGKLEAGESPDECAKREIFEETHFTVKDMDFKGIITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILEDRPFFSAKFAYDSAGQLVEKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=254110 DLJ52_RS06350 WP_002961744.1 1312924..1313406(-) (mutX) [Streptococcus sobrinus strain NIDR 6715-15]
ATGACCAAGCTAGCAACCATTTGTTACATTGATAACGGAAAAGAACTTCTGCTCATGCTCCGCAACAAGAAACCCAATGA
TGTCCATGAGGGCAAGTGGATTTCTGTTGGAGGCAAGTTGGAAGCAGGAGAAAGCCCAGATGAGTGTGCTAAGAGAGAGA
TTTTCGAGGAAACCCATTTTACCGTCAAGGACATGGATTTCAAGGGAATCATTACCTTCCCTGAATTTACGCCAGGTCAT
GATTGGTACACCTATGTCTTTAAGGTGACAGATTTTGAGGGAGAACTGATTTCTGATGAGGAGTCGCGGGAAGGCACTCT
TGAATGGGTTCCTTATGACCAGGTCCTCTCCAAGCCCACCTGGGAAGGGGACTATGAAATCTTTAAATGGATTTTGGAAG
ACCGTCCCTTCTTCTCAGCAAAGTTTGCCTACGACTCAGCTGGTCAGCTGGTTGAAAAAAGTGTCACATTTTACGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

99.375

0.681