Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   DLJ52_RS02505 Genome accession   NZ_CP029559
Coordinates   477884..478684 (+) Length   266 a.a.
NCBI ID   WP_019768874.1    Uniprot ID   -
Organism   Streptococcus sobrinus strain NIDR 6715-15     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 472884..483684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLJ52_RS02480 (DLJ52_02480) - 473730..474827 (+) 1098 WP_019785414.1 DUF5937 family protein -
  DLJ52_RS02485 (DLJ52_02485) - 474846..475376 (+) 531 WP_109982443.1 transcriptional regulator -
  DLJ52_RS02490 (DLJ52_02490) - 475580..476239 (+) 660 WP_002960420.1 CBS domain-containing protein -
  DLJ52_RS02495 (DLJ52_02495) tmk 476368..477021 (+) 654 WP_109982444.1 dTMP kinase -
  DLJ52_RS02500 (DLJ52_02500) - 477024..477887 (+) 864 WP_002960415.1 DNA polymerase III subunit delta' -
  DLJ52_RS02505 (DLJ52_02505) yaaT 477884..478684 (+) 801 WP_019768874.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  DLJ52_RS02510 (DLJ52_02510) yabA 478677..478997 (+) 321 WP_002960412.1 DNA replication initiation control protein YabA -
  DLJ52_RS02515 (DLJ52_02515) rsmI 479001..479867 (+) 867 WP_109982445.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  DLJ52_RS02520 (DLJ52_02520) - 480087..481322 (+) 1236 WP_109982446.1 ammonium transporter -
  DLJ52_RS02525 (DLJ52_02525) - 481390..481731 (+) 342 WP_019769579.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29780.08 Da        Isoelectric Point: 6.1316

>NTDB_id=254079 DLJ52_RS02505 WP_019768874.1 477884..478684(+) (yaaT) [Streptococcus sobrinus strain NIDR 6715-15]
MTEVIGVKYEENDLLSYVLPDQAYEKNDLVVVPLRKGNRLAQVVQANQDLDDKVLPAQVDRVLGPARQQDLEQHRANQVF
AQDNMTAVKDMIANRNLKMKLVSIAFPLDRSHVFISFTAEHRVDFRQLLKDLAGYFRARIELRQINTRDEAKIFGGLGPC
GRPLCCSSFLGDFPPVSIKMVKNQGLSLNTGKTTGLCGRLLCCLSFEDDFYREAKQKFPDFGSPVETAEGSGTVAGMDVF
AETVKVRFEDRASLLTYSLEEISLHG

Nucleotide


Download         Length: 801 bp        

>NTDB_id=254079 DLJ52_RS02505 WP_019768874.1 477884..478684(+) (yaaT) [Streptococcus sobrinus strain NIDR 6715-15]
ATGACAGAAGTAATAGGGGTAAAATATGAGGAAAATGACCTCCTTTCCTATGTTTTGCCAGATCAAGCTTATGAAAAAAA
TGATTTAGTCGTGGTTCCCCTGCGAAAGGGCAACCGTCTGGCTCAGGTCGTTCAGGCCAATCAGGACCTGGATGATAAGG
TCTTACCTGCTCAAGTGGATAGGGTCCTGGGACCGGCCCGTCAGCAGGATCTAGAGCAACATCGGGCTAATCAGGTCTTC
GCCCAGGACAATATGACGGCGGTCAAGGATATGATTGCCAACCGTAATCTGAAGATGAAGTTGGTTAGTATTGCCTTCCC
GCTGGATCGCAGTCATGTCTTCATTTCTTTTACGGCTGAGCACCGGGTGGACTTCCGCCAGTTGCTCAAGGACTTGGCGG
GTTATTTCCGAGCTAGGATTGAATTGCGGCAGATCAATACCCGAGATGAGGCCAAGATTTTTGGTGGTCTAGGTCCCTGT
GGTCGCCCGCTTTGTTGCTCTAGTTTCCTAGGAGATTTTCCACCCGTTTCGATTAAGATGGTCAAAAACCAGGGACTTTC
CCTAAATACTGGAAAAACAACAGGTCTTTGTGGCCGTCTGCTCTGCTGTCTCAGCTTTGAGGATGACTTTTACCGAGAAG
CCAAGCAGAAGTTTCCTGATTTTGGTAGTCCGGTGGAAACGGCGGAAGGTAGCGGAACCGTGGCAGGTATGGACGTCTTT
GCTGAAACGGTCAAGGTCCGTTTTGAAGACCGGGCCAGCCTATTGACCTATAGTTTGGAGGAGATTAGTTTACATGGATA
A

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

44.238

100

0.447