Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   DKG71_RS00775 Genome accession   NZ_CP029541
Coordinates   159329..159541 (-) Length   70 a.a.
NCBI ID   WP_109886396.1    Uniprot ID   -
Organism   Streptomyces sp. NEAU-S7GS2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 154329..164541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG71_RS00755 (DKG71_00755) - 155775..156170 (-) 396 WP_239471491.1 hypothetical protein -
  DKG71_RS00760 (DKG71_00760) - 156192..156557 (-) 366 WP_018091439.1 VOC family protein -
  DKG71_RS00765 (DKG71_00765) - 156653..157618 (+) 966 WP_018091438.1 WYL domain-containing protein -
  DKG71_RS00770 (DKG71_00770) - 157702..158934 (-) 1233 WP_162596795.1 hypothetical protein -
  DKG71_RS00775 (DKG71_00775) dinR/lexA 159329..159541 (-) 213 WP_109886396.1 winged helix-turn-helix transcriptional regulator Regulator
  DKG71_RS00780 (DKG71_00780) - 159538..159783 (-) 246 WP_109886397.1 hypothetical protein -
  DKG71_RS00785 (DKG71_00785) - 160248..161207 (+) 960 WP_109895749.1 DUF5996 family protein -
  DKG71_RS00790 (DKG71_00790) - 161588..162241 (+) 654 WP_109886398.1 HNH endonuclease family protein -
  DKG71_RS42465 - 162740..162985 (+) 246 WP_162596796.1 hypothetical protein -
  DKG71_RS00800 (DKG71_00800) - 163001..164125 (+) 1125 WP_109886400.1 hypothetical protein -
  DKG71_RS00805 (DKG71_00805) - 164122..164391 (+) 270 WP_109886401.1 hypothetical protein -

Sequence

Protein


Download         Length: 70 a.a.        Molecular weight: 7965.01 Da        Isoelectric Point: 10.0848

>NTDB_id=253974 DKG71_RS00775 WP_109886396.1 159329..159541(-) (dinR/lexA) [Streptomyces sp. NEAU-S7GS2]
MTAYLSDSQRRIARVLRELTDEAGYPPSIREIADAVALSASTVAYHLQALERRGLVTHAPHRSRSYQVRW

Nucleotide


Download         Length: 213 bp        

>NTDB_id=253974 DKG71_RS00775 WP_109886396.1 159329..159541(-) (dinR/lexA) [Streptomyces sp. NEAU-S7GS2]
ATGACCGCCTACCTCAGCGACAGCCAGCGCCGGATCGCCCGGGTCCTGCGGGAGCTGACCGACGAGGCCGGCTACCCGCC
GTCGATACGGGAGATCGCCGACGCGGTCGCCCTGTCCGCCTCGACGGTCGCTTACCACCTGCAGGCCCTGGAACGCCGCG
GGCTCGTCACTCATGCCCCGCACCGAAGCCGCTCGTACCAGGTGCGGTGGTAG

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(5-64)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

43.077

92.857

0.4