Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | DK182_RS00490 | Genome accession | NZ_CP029491 |
| Coordinates | 75954..76577 (+) | Length | 207 a.a. |
| NCBI ID | WP_002962720.1 | Uniprot ID | A0ABN5LFP3 |
| Organism | Streptococcus sobrinus strain 10919 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 70954..81577
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK182_RS00490 (DK181_00490) | comX | 75954..76577 (+) | 624 | WP_002962720.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| DK182_RS00495 (DK181_00495) | - | 76760..77779 (-) | 1020 | WP_109833400.1 | IS30 family transposase | - |
| DK182_RS00500 (DK181_00500) | rplM | 78052..78498 (+) | 447 | WP_002962718.1 | 50S ribosomal protein L13 | - |
| DK182_RS00505 (DK181_00505) | rpsI | 78518..78910 (+) | 393 | WP_019775615.1 | 30S ribosomal protein S9 | - |
| DK182_RS00510 (DK181_00510) | ruvB | 79185..80183 (+) | 999 | WP_019791893.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| DK182_RS00515 (DK181_00515) | - | 80228..80653 (+) | 426 | WP_109833401.1 | low molecular weight protein-tyrosine-phosphatase | - |
| DK182_RS00520 (DK181_00520) | - | 80632..81066 (+) | 435 | WP_002962711.1 | MORN repeat-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 24561.19 Da Isoelectric Point: 4.8066
>NTDB_id=253797 DK182_RS00490 WP_002962720.1 75954..76577(+) (comX) [Streptococcus sobrinus strain 10919]
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
Nucleotide
Download Length: 624 bp
>NTDB_id=253797 DK182_RS00490 WP_002962720.1 75954..76577(+) (comX) [Streptococcus sobrinus strain 10919]
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAAACTGTTAGCAAACTAGCCAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAAACTGTTAGCAAACTAGCCAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Streptococcus sobrinus strain NIDR 6715-7 |
100 |
100 |
1 |