Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DK181_RS06400 Genome accession   NZ_CP029490
Coordinates   1321100..1321582 (-) Length   160 a.a.
NCBI ID   WP_002961744.1    Uniprot ID   A0ABM6W620
Organism   Streptococcus sobrinus strain SL1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1316100..1326582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK181_RS06385 (DK182_06385) alsS 1316832..1318505 (-) 1674 WP_019769201.1 acetolactate synthase AlsS -
  DK181_RS06390 (DK182_06390) - 1318709..1319935 (-) 1227 WP_002961741.1 tetratricopeptide repeat protein -
  DK181_RS06395 (DK182_06395) - 1319925..1321091 (-) 1167 WP_019770332.1 AI-2E family transporter -
  DK181_RS06400 (DK182_06400) mutX 1321100..1321582 (-) 483 WP_002961744.1 NUDIX hydrolase Machinery gene
  DK181_RS06405 (DK182_06405) - 1321717..1322733 (+) 1017 WP_002961746.1 lactonase family protein -
  DK181_RS06410 (DK182_06410) - 1322932..1323744 (+) 813 WP_002961748.1 sugar phosphate isomerase/epimerase family protein -
  DK181_RS06415 (DK182_06415) - 1323815..1324006 (+) 192 WP_002961750.1 hypothetical protein -
  DK181_RS06420 (DK182_06420) - 1324371..1325468 (-) 1098 WP_002961752.1 NAD(P)/FAD-dependent oxidoreductase -
  DK181_RS06425 (DK182_06425) - 1325476..1326300 (-) 825 WP_028798491.1 ZIP family metal transporter -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18662.02 Da        Isoelectric Point: 4.3732

>NTDB_id=253753 DK181_RS06400 WP_002961744.1 1321100..1321582(-) (mutX) [Streptococcus sobrinus strain SL1]
MTKLATICYIDNGKELLLMLRNKKPNDVHEGKWISVGGKLEAGESPDECAKREIFEETHFTVKDMDFKGIITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILEDRPFFSAKFAYDSAGQLVEKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=253753 DK181_RS06400 WP_002961744.1 1321100..1321582(-) (mutX) [Streptococcus sobrinus strain SL1]
ATGACCAAGCTAGCAACCATTTGTTACATTGATAACGGAAAAGAACTTCTGCTCATGCTCCGCAACAAGAAACCCAATGA
TGTCCATGAGGGCAAGTGGATTTCTGTTGGAGGCAAGTTGGAAGCAGGAGAAAGCCCAGATGAGTGTGCTAAGAGAGAGA
TTTTCGAGGAAACCCATTTTACCGTCAAGGACATGGATTTCAAGGGAATCATTACCTTCCCTGAATTTACGCCAGGTCAT
GATTGGTACACCTATGTCTTTAAGGTGACAGATTTTGAGGGAGAACTGATTTCTGATGAGGAGTCGCGGGAAGGCACTCT
TGAATGGGTTCCTTATGACCAGGTCCTCTCCAAGCCCACCTGGGAAGGGGACTATGAAATCTTTAAATGGATTTTGGAAG
ACCGTCCCTTCTTCTCAGCAAAGTTTGCCTACGACTCAGCTGGTCAGCTGGTTGAAAAAAGTGTCACATTTTACGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

99.375

0.681

Multiple sequence alignment